Job Description P0A8L1 Confidence 99.13% Date Thu Jan 5 11:08:05 GMT 2012 Rank 50 Aligned Residues 153 % Identity 16% Template c3racA_ PDB info PDB header:ligase Chain: A: PDB Molecule:histidine-trna ligase; PDBTitle: crystal strucutre of histidine--trna ligase subunit from2 alicyclobacillus acidocaldarius subsp. acidocaldarius dsm 446. Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	F	V	V	M	K	G	Q	I	A	R	M	H	R	A	L	S	Q	F	M	L	D	L	H	T	E	Q	H	G	Y	S	E	N	Y	V	P	Y	L	V	N	Q	D	T	L	Y	G	T	G	Q	L	P	K	F	A	G	D	L	F	H	T	R	P	L	E	E	E	A	D	T	S	N	Y	A	L	I	P	T	A	E
Query Conservation
Alig confidence																											.																						.																					.	.	.	.
Template Conservation																											.																						.																					.	.	.	.
Template Sequence		P	G	M	Q	D	G	Y	P	D	F	A	K	R	R	R	A	V	E	T	R	L	L	S	F	V	.	E	D	A	G	Y	E	P	V	T	S	G	L	F	E	Y	V	D	T	L	L	R	.	A	R	S	P	E	S	S	R	D	W	I	R	L	F	D	G	G	G	D	A	.	.	.	.	V	A	L	R	P	E	M	T
Template Known Secondary structure		T	T						T	T																	.			T	T								S									T	.	T	S		T	T	S						B					S	S	S		.	.	.	.					S	S	S
Template Predicted Secondary structure																											.																						.																					.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	L	T	N	L	V	R	G	E	I	I	D	E	D	D	L	P	I	K	M	T	A	H	T	P	C	F	R	S	E	A	G	S	Y	G	R	D	T	R	G	L	I	R	M	H	Q	F	D	K	V	E	M	V	Q	I	V	R	P	E	D	S	M	A	A	L	E	E	M	T	G	H	A	E	K	V	L	Q	L	L
Query Conservation
Alig confidence															.																		.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation															.																		.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		P	S	I	A	R	M	A	A	P	R	V	A	A	.	G	R	T	P	I	R	W	C	Y	C	E	R	V	Y	R	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	E	S	T	Q	V	G	I	E	R	I	G	E	E	A	S	V	D	V	D	M	.	D	V	L	R	L	L	H	E	A	S	A	A	A
Template Known Secondary structure														T	.	T																	.	.	.	.	.	.	.	.	.	.	.	.	.													S	S									.
Template Predicted Secondary structure															.																		.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.														.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	P	Y	R	K	I	I	L	C	T	G	D	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	R	H	H	R	I	V	V	S	H	A	R	L
Template Known Secondary structure		T			S								T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions