Job Description P0A8L1 Confidence 77.24% Date Thu Jan 5 11:08:05 GMT 2012 Rank 95 Aligned Residues 148 % Identity 14% Template c3pcoD_ PDB info PDB header:ligase Chain: D: PDB Molecule:phenylalanyl-trna synthetase, beta chain; PDBTitle: crystal structure of e. coli phenylalanine-trna synthetase complexed2 with phenylalanine and amp Resolution 3.02 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	L	H	T	E	Q	H	G	Y	S	E	N	Y	V	P	Y	L	V	N	Q	D	T	L	Y	G	T	G	Q	L	P	K	F	A	G	D	L	F	H	T	R	P	L	E	E	E	A	D	T	S	N	Y	A	L	I	P	T	A	E	V	P	L	T	N	L	V	R	G	E	I	I	D	E	D	D	L	P	I	K	M
Query Conservation
Alig confidence																															.	.	.	.																	.	.	.																		.
Template Conservation																															.	.	.	.																	.	.	.																		.
Template Sequence		V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q	M	I	H	P	.	.	.	.	G	V	E	A	L	L	L	P	S	P	I	S	V	E	M	S	.	.	.	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	.	Q	N	R	Q	Q	N	R	V	R	I
Template Known Secondary structure									S	S								S				T	T						S	T	.	.	.	.	T					B		S	S		S		G	G	G		.	.	.				S		S												.			T	T
Template Predicted Secondary structure																															.	.	.	.																	.	.	.																		.
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.					.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.				.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.		560	.	.	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.								300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.
Query Sequence		T	A	H	T	P	C	F	R	S	E	A	G	S	Y	G	R	D	T	R	G	L	I	R	M	H	Q	F	D	K	V	E	M	V	Q	I	V	R	P	E	.	.	.	.	.	.	.	D	S	M	A	A	L	E	E	M	T	G	H	A	E	K	V	L	Q	L	L	G	L	P	Y	R	K	I	I	L	C	T	G	D	M
Query Conservation																																									.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		F	E	S	G	L	R	F	V	P	D	T	Q	A	P	L	.	.	.	.	.	.	.	G	I	R	Q	D	L	M	L	A	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T	V	D	F	Y	D	L	K	G	D	L	E	S	V	L	D	L	T	G	K	L	N	E	V	E	F	R	A	E	A	N	P
Template Known Secondary structure												T	T	S	S	T	.	.	.	.	.	.	.	T													S	B	S	S	S	S		T	T	S				B													S	S	S	S	S	S			S	S									S
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.								.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		334	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	G	A	C	K	T	Y	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	H	P	G	Q	S	A	A	I
Template Known Secondary structure		S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		643	.	.	.	.	.	.	650	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions