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Job DescriptionP0A8L1
Confidence100.00%DateThu Jan 5 11:08:05 GMT 2012
Rank14Aligned Residues264
% Identity19%Templatec3mf2B_
PDB info PDB header:ligaseChain: B: PDB Molecule:bll0957 protein; PDBTitle: crystal structure of class ii aars homologue (bll0957) complexed with2 amp
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   142.......150.........160.........170.........180.........190.........200.........210.........220.
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Query Sequence  LGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTR
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Template Sequence  LDHLADKLFHSMGS. . . . DGVYARTALYESIVERLAAL. ITSH. REAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCVC
Template Known Secondary structure  TGGG....TT
.T.

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STT
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   20.........30... ......40.........50... .... ..60.........70.........80.........90...
 
   222..... ..230.........240.........250.........260.........270.........280.
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Query Sequence  PLEEEA. . . . . . . . . . . . . . . . . . . . DTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGL
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Template Sequence  GLHGTEREINAAVSRFDAGGDWTTSLSPADLVLSPAACYPVYPIAASR. GPLPKGGLRFDVAADCFRREPS. . . . . . KHL
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S
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GGGG
SSSSTTTT.
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   94.....100.........110.........120.........130.........140. ........150.........160... ...
 
   282.......290.........300.........310.........320.........330......... 340.........350.
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Query Sequence  IRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACK. . . . . . . . . . TYDLEVWIPAQN
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Template Sequence  DRLQSFRMREYVCIGTPDDVSDFRERWMVRAQAIARDLGLTFRVDYASDPFFGRVGQMKAVSQKQQQLKFELLIPLRSEE
Template Known Secondary structure  TS
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   352.......360.........370.........380.........390.........400.........410.........420......
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Query Sequence  TYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGL
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Template Sequence  QPTACMSFNYHREHFGTTWGIQDANGE. . . . . PAHT. GCVAFGMDRLAVAMFHTHGTD. . LSAWPAKVRDILGLQ
Template Known Secondary structure  S

TTT
B
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   247..250.........260.........270... .... ..280.........290........ .300.........310...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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