Job Description P0A8L1 Confidence 99.10% Date Thu Jan 5 11:08:05 GMT 2012 Rank 53 Aligned Residues 218 % Identity 14% Template c3l4gI_ PDB info PDB header:ligase Chain: I: PDB Molecule:phenylalanyl-trna synthetase alpha chain; PDBTitle: crystal structure of homo sapiens cytoplasmic phenylalanyl-trna2 synthetase Resolution 3.30 Å

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		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.							.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.																							.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.																							.	.	.	.	.
Query Sequence		K	L	T	G	S	R	F	V	V	M	K	G	Q	I	A	R	M	H	R	A	L	S	Q	F	M	L	D	L	H	T	E	Q	H	G	Y	S	E	N	Y	V	P	Y	L	V	N	Q	D	.	.	.	.	.	.	T	L	Y	G	T	G	Q	L	P	K	F	A	G	D	L	F	H	T	R	P	L	E	.	.	.	.	.
Query Conservation																																																	.	.	.	.	.	.																							.	.	.	.	.
Alig confidence																										.						.																	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation																										.						.
Template Sequence		N	F	L	A	H	G	V	L	P	D	S	G	H	L	H	P	L	L	K	V	R	S	Q	F	.	R	Q	I	F	L	.	E	M	G	F	T	E	M	P	T	D	N	F	I	E	S	S	F	W	N	F	D	A	L	F	Q	P	Q	Q	H	P	A	R	D	Q	H	D	T	F	F	L	R	D	P	A	E	A	L	Q	L
Template Known Secondary structure				S	S																					.						.		T	T									S								T	G	G	G	T			S	S		G	G	G	S	T	T	T	S		B		S	S	S		B		S
Template Predicted Secondary structure																										.						.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
																												225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	A	D	T	S	N	Y	A	L	I	P	T	A	E	V	P	L	T	N	L	V	R	G	E	I	I	D	E	D	D	L	P	I	K	M	T	A	H	T	P	C	F	R	S	E	A	G	S	Y	G	R	D	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		P	M	D	Y	V	Q	R	V	K	R	T	H	S	Q	G	G	Y	G	S	Q	G	Y	K	Y	N	W	K	L	D	E	A	R	K	N	L	L	R	T	H	T	T	S	A	S	A	R	A	L	Y	R	L	A	Q	K	K	P	F	T	P	V	K	Y	F	S	I	D	R	V	F	R	N	E	T	L	D	A	T	.	.	.
Template Known Secondary structure															T		B	T	T	B					S								T	B							T													T	S	S	S																		S	B	T	T	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	L	I	R	M	H	Q	F	D	K	V	E	M	V	Q	I	V	R	P	E	D	S	M	A	A	L	E	E	M	T	G	H	A	E	K	V	L	Q	L	L	G	L	P	Y	R	K	I	I	L	C	T	G	D	M	G	F	G	A	C	K	T	Y	D	L	E	V	W	I	P	A	Q	N	T	Y	R	E	I	S	S
Query Conservation
Alig confidence		.	.	.	.																	.	.	.	.																					.								.	.
Template Conservation		.	.	.	.																	.	.	.	.																					.								.	.
Template Sequence		.	.	.	.	H	L	A	E	F	H	Q	I	E	G	V	V	A	D	H	G	.	.	.	.	L	T	L	G	H	L	M	G	V	L	R	E	F	F	T	K	L	G	I	T	.	Q	L	R	F	K	P	A	.	.	Y	N	P	Y	T	E	P	S	M	E	V	F	S	Y	H	Q	G	L	K	K	W	V	E	V	G	N
Template Known Secondary structure		.	.	.	.	B		S													S	.	.	.	.																T	T	T			.								.	.			T	T		S	S								B	T	T	T	T	B
Template Predicted Secondary structure		.	.	.	.																	.	.	.	.																					.								.	.
Template SS confidence
						366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.					.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.		.	.	.	.	.	.	.			.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	N	V	W	D	F	Q	A	R	R	M	Q	A	R	C	R	S	K	S	D	K	K	T	R	L	V	H	T	L	N	G	S	G	L	A	V	G	R	T	L
Query Conservation
Alig confidence																.	.	.				.	.	.	.	.	.	.
Template Conservation																.	.	.				.	.	.	.	.	.	.
Template Sequence		S	G	V	F	R	P	E	M	L	L	P	M	G	L	.	.	.	P	E	N	.	.	.	.	.	.	.	V	S	V	I	A	W	G	L	S	L	E	R	P	T
Template Known Secondary structure											G	G	G	T		.	.	.		T	T	.	.	.	.	.	.	.										S
Template Predicted Secondary structure																.	.	.				.	.	.	.	.	.	.
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.				.	450	.								.	.	.	.	.	.	.	.	460	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions