Job Description P0A8L1 Confidence 100.00% Date Thu Jan 5 11:08:05 GMT 2012 Rank 17 Aligned Residues 270 % Identity 18% Template c3ialB_ PDB info PDB header:ligase Chain: B: PDB Molecule:prolyl-trna synthetase; PDBTitle: giardia lamblia prolyl-trna synthetase in complex with prolyl-2 adenylate Resolution 2.20 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		H	V	T	L	G	E	M	H	S	G	L	D	F	A	A	A	V	K	L	T	G	S	R	F	V	V	M	K	G	Q	I	A	R	M	H	R	A	L	S	Q	F	M	L	D	L	H	T	E	Q	H	G	Y	S	E	N	Y	V	P	Y	L	V	N	Q	D	T	L	Y	G	.	T	G	Q	L	P	K	F	A	G	D	L
Query Conservation																																																																						.
Alig confidence																			.	.	.	.																										.																						.
Template Conservation																			.	.	.	.																										.
Template Sequence		F	D	A	I	M	D	A	A	E	L	V	D	R	R	Y	P	V	.	.	.	.	K	G	C	V	V	F	R	P	Y	G	F	F	M	E	N	A	I	M	R	L	C	E	E	E	Y	.	A	K	V	G	I	S	Q	I	L	F	P	T	V	I	P	E	S	F	L	K	K	E	S	D	H	I	K	G	F	E	A	E	C
Template Known Secondary structure									T	T				T	T	S	S	S	.	.	.	.	T	T																								.			T	T								S								T	S	S								G	G	G
Template Predicted Secondary structure																			.	.	.	.																										.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		F	H	T	R	P	L	E	E	E	A	D	T	S	N	Y	A	L	I	P	T	A	E	V	P	L	T	N	L	V	R	G	E	I	I	D	E	D	D	L	P	I	K	M	T	A	H	T	P	C	F	R	S	E	A	G	S	Y	G	R	D	T	R	G	L	I	R	M	H	Q	F	D	K	V	E	M	V	.	Q	I	V
Query Conservation																																																																														.
Alig confidence																																																								.	.	.	.																			.
Template Conservation																																																								.	.	.	.
Template Sequence		F	W	V	E	K	G	G	L	Q	P	L	E	E	R	L	A	L	R	P	T	S	E	T	A	I	Y	S	M	F	S	K	W	V	R	S	Y	K	D	L	P	L	K	I	H	Q	T	C	T	I	F	R	H	E	T	.	.	.	.	K	N	T	K	P	L	I	R	V	R	E	I	H	W	N	E	A	H	C	C	H	A
Template Known Secondary structure								T	T											S	S	S													S	B	G	G	G														T	T		.	.	.	.		S		B	T	T	T	B		S												S
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		R	P	E	D	S	M	A	A	L	E	E	M	T	G	H	A	E	K	V	L	Q	L	.	L	G	L	P	Y	R	K	I	I	L	C	T	G	D	M	G	F	G	A	C	K	T	Y	D	L	E	V	W	I	P	A	Q	N	T	Y	R	E	I	S	S	C	S	N	V	W	D	F	Q	A	R	R	M	Q	A	R	C	R
Query Conservation																								.
Alig confidence																								.																															.
Template Conservation																																																							.
Template Sequence		T	A	E	D	A	V	S	Q	L	S	D	Y	W	K	V	I	D	T	I	F	S	D	E	L	C	F	K	G	Q	K	L	R	R	V	C	W	D	R	F	P	G	A	D	Y	S	E	V	S	D	V	V	M	P	.	C	G	R	V	L	Q	T	A	G	I	H	N	L	G	Q	R	F	S	S	T	F	D	I	L	Y	A
Template Known Secondary structure		S																				T	T	T	T											G	G	G			T	T		S										T	.	T	S													T						T	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	S	D	K	K	T	R	L	V	H	T	L	N	G	S	G	L	A	V	G	R	T	L	V	A	V	M	E	N	Y	Q	Q	A	D	G	R	I	E	V	P	E	V	L	R	P	Y
Query Conservation
Alig confidence																			.	.	.																	.
Template Conservation																			.	.	.																	.
Template Sequence		N	K	A	N	E	S	V	H	P	Y	L	T	C	A	G	I	S	.	.	.	T	R	V	L	A	C	A	L	S	I	H	G	D	S	G	G	.	L	V	L	P	P	L	I	A	P	I
Template Known Secondary structure			T	T															.	.	.	T												B	T	T	B	.					G	G	G		S
Template Predicted Secondary structure																			.	.	.																	.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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