Job Description P0A8L1 Confidence 98.65% Date Thu Jan 5 11:08:05 GMT 2012 Rank 60 Aligned Residues 118 % Identity 14% Template c3g1zB_ PDB info PDB header:ligase Chain: B: PDB Molecule:putative lysyl-trna synthetase; PDBTitle: structure of idp01693/yjea, a potential t-rna synthetase from2 salmonella typhimurium Resolution 1.95 Å

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	H	R	A	L	S	Q	F	M	L	D	L	H	T	E	Q	H	G	Y	S	E	N	Y	V	P	Y	L	V	N	Q	D	T	L	Y	G	T	G	Q	L	P	K	F	A	G	D	L	F	H	T	R	P	L	E	E	E	A	D	T	S	N	Y	A	L	I	P	T	A	E	V	P	L	T	N	L	V	R	G	E	I
Query Conservation
Alig confidence																.																			.	.	.	.	.	.	.																				.	.
Template Conservation																.																			.	.	.	.	.	.	.																				.	.
Template Sequence		L	K	R	A	A	I	M	A	E	I	R	R	F	F	.	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	.	.	.	.	.	.	.	T	D	I	H	L	F	P	F	E	T	R	F	V	G	P	Q	G	I	N	.	.	L	Y	L	M	T	S	P	E	Y	H	M	K	R	L	L	A	A	G	C
Template Known Secondary structure																.			T	T								S			S				.	.	.	.	.	.	.			T	T																.	.					S		S										T	T
Template Predicted Secondary structure																.																			.	.	.	.	.	.	.																				.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		I	D	E	D	D	L	P	I	K	M	T	A	H	T	P	C	F	R	S	E	A	G	S	Y	G	R	D	T	R	G	L	I	R	M	H	Q	F	D	K	V	E	M	V	Q	I	.	V	R	P	E	D	S	M	A	A	L	E	E	M	T	G	H	A
Query Conservation																																															.
Alig confidence			.	.	.	.	.	.	.																		.	.	.	.	.	.	.														.
Template Conservation			.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Sequence		G	.	.	.	.	.	.	.	P	V	F	Q	L	C	R	S	F	R	N	E	E	M	G	R	H	.	.	.	.	.	.	.	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	Y	D	M	Y	R	L	M	N	E	V	D	D	L	L	Q	Q	V
Template Known Secondary structure			.	.	.	.	.	.	.	S														B	T	T	.	.	.	.	.	.	.	B		S											T
Template Predicted Secondary structure			.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		90								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.								.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions