 |
Job Description | P0A8L1 | Confidence | 54.08% | Date | Thu Jan 5 11:08:05 GMT 2012 |
Rank | 106 | Aligned Residues | 92 |
% Identity | 14% | Template | c3dtpA_ |
PDB info |
PDB header:contractile protein | Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and |
PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map
|
Resolution | 20.00 Å |
|
 |
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | N | L | L | R | N | E | P | D | A | V | A | E | K | L | A | R | R | G | F | K | L | D | V | D | K | L | G | A | L | E | E | R | R | K | V | L | Q | V | K | T | E | N | L | Q | A | E | R | N | S | R | S | K | S | I | G | Q | A | K | A | R | G | E | D | I | E | P | L | R | L | E | V | N | K | L | G | E | E | L | D |
Query Conservation |   |
|
|   |
|
|   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |
|
|
|   |
|   |   |
|
|   |
|   |
|   |
|   |   |
|   |
|   |
|   |   |
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |
|   |
|   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |
|   |   |   |
|   |   |
|   |   |   |
| . | . | . | . | . |   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |
|
|
| . | . | . |   |
|
|
|   |   |
|   |   |   |   |
|
|   |   |
|
|   |
Template Sequence |   |
R | K | E | L | E | E | K | M | V | S | L | L | Q | E | K | N | D | L | . |
. |
. |
. |
. |
Q | L | Q | V | Q | A | E | Q | D | N | L | A | D | A | E | E | R | C | D | Q | L | I | K | N | K | I | Q | L | E | A | K | V | K | E | M | N | . |
. |
. |
E | R | L | E | D | E | E | E | M | N | A | E | L | T | A | K | K | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
881 | . | . | . | . | . | . | . | . | 890 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 900 | . | . | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | |
|
|
. | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | K | A | E | L | D | A | L | Q | A | E | I | R | D | I | A | L | T | I |
Query Conservation |   |
  |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |   |
|
|
|   |
|
|
|
|
|
|   |
|
|
Template Sequence |   |
K | L | E | D | E | C | S | E | L | K | R | D | I | D | D | L | E | L | T | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
953 | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|