Job Description P0A8L1 Confidence 98.26% Date Thu Jan 5 11:08:05 GMT 2012 Rank 69 Aligned Residues 120 % Identity 20% Template c3bjuB_ PDB info PDB header:ligase Chain: B: PDB Molecule:lysyl-trna synthetase; PDBTitle: crystal structure of tetrameric form of human lysyl-trna2 synthetase Resolution 2.31 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		Q	I	A	R	M	H	R	A	L	S	Q	F	M	L	D	L	H	T	E	Q	H	G	Y	S	E	N	Y	V	P	Y	L	V	N	Q	D	T	L	Y	G	T	G	Q	L	P	K	F	A	G	D	L	F	H	T	R	P	L	E	E	E	A	D	T	S	N	Y	A	L	I	P	T	A	E	V	P	L	.	T	N	L	V
Query Conservation																																																																													.
Alig confidence																			.																	.	.	.	.				.	.																	.	.	.	.	.												.
Template Conservation																			.																	.	.	.	.				.	.																	.	.	.	.	.
Template Sequence		Q	K	F	I	I	R	S	K	I	I	T	Y	I	R	S	F	L	.	D	E	L	G	F	L	E	I	E	T	P	M	M	N	I	I	.	.	.	.	P	G	G	.	.	A	V	A	K	P	F	I	T	Y	H	N	E	L	D	M	N	.	.	.	.	.	L	Y	M	R	I	A	P	E	L	Y	H	K	M	L	V	V
Template Known Secondary structure																			.			T	T								S			S	S	.	.	.	.			S	.	.	S	S	S								T	T	T	T			.	.	.	.	.					S		S
Template Predicted Secondary structure																			.																	.	.	.	.				.	.																	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.					.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.						.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		R	G	E	I	I	D	E	D	D	L	P	I	K	M	T	A	H	T	P	C	F	R	S	E	A	G	S	Y	G	R	D	T	R	G	L	I	R	M	H	Q	F	D	K	V	E	M	V	.	Q	I	V	R	P	E	D	S	M	A	A	L	E	E	M	T	G	H	A	E	K
Query Conservation																																																	.
Alig confidence						.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.												.
Template Conservation						.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Sequence		G	G	I	D	.	.	.	.	.	.	.	.	R	V	Y	E	I	G	R	Q	F	R	N	E	G	I	D	L	T	.	.	.	.	.	.	.	H	N	P	E	F	T	T	C	E	F	Y	M	A	Y	A	D	Y	H	D	L	M	E	I	T	E	K	M	V	S	G	M	V	K
Template Known Secondary structure		T	T			.	.	.	.	.	.	.	.															B	T	T	.	.	.	.	.	.	.	B		S											T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		310	.	.	.									.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330								.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions