Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8L1
Confidence100.00%DateThu Jan 5 11:08:05 GMT 2012
Rank29Aligned Residues268
% Identity17%Templatec3a32A_
PDB info PDB header:ligaseChain: A: PDB Molecule:probable threonyl-trna synthetase 1; PDBTitle: crystal structure of putative threonyl-trna synthetase2 thrrs-1 from aeropyrum pernix
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170.........180.........190.........200.........210..
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Query Sequence  DFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPK
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Template Sequence  ITVKPDSRVPVFNREFATF. . . . . . TGAGVPLFSLGGGPIRYALAEVLAKFH. ARRGYYVVETPIIASTELFKVSGHIEF
Template Known Secondary structure  SB

TTSB
TTT
SBT......
TT


B
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TT
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   18.20.........30...... ...40.........50.........60... ......70.........80.........90
 
   213......220.........230.........240.........250. ........260.........270.........280.........
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Query Sequence  FAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEII. . . DEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDK
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Template Sequence  YRNNMYLFDIEGHE. . . . . FAVKPMNCPYHILLFLNEVAKHRSKLPLPFKVFEFGRVHRYEPSG. . . SIYGLLRVRGFTQ
Template Known Secondary structure  GGGGSTT.....
S
SGGGS
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GG...G
BTTTB
S
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   91........100.... .....110.........120.........130.........140......... 150.........160..
 
   290.........300.........310......... 320.........330........
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Query Sequence  VEMVQIVRPEDSMAALEEMTGHAEKVLQLL. . . . . . . . GLPYRKIILCTGDMGFGAC. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  DDAHIIVPGGRVIDVVYDVFEEMKLVLERLFKLGVSSETFKVRLSMSDKSLIGKEFMGSKEEWEGAEEALREAASRINEK
Template Known Secondary structure  GGGTS



STTT


GGGBTTTB
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   339340.........350.........360...... ...370.. .......380.........390........
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Query Sequence  . . . . . . . . . . . . . . . . . . KTYDLEVWIPAQNTYREISSCSNVWDFQ. ARRMQA. RCRSKSDKKTRLVHTLNGSGLAVGRT
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Template Sequence  YGIDIVELEGEAAFYGPKLDFIMMVEESGVSKEWQMGTIQ. . FDFNLPRRFRLYDVVREEFGIEEVYIIHRALLGSIERF
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TT
SBTTB
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   243......250.........260.........270.........280.. .......290.........300.........310.........320
 
   399400.........410.........420..
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Query Sequence  LVAVMENYQQADGRIEVPEVLRPY
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Template Sequence  LGVYLEHRRGR. . . . . MPFTLAPI
Template Known Secondary structure  TTT
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GGG
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   321........330. ........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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