Job Description P0A8L1 Confidence 99.55% Date Thu Jan 5 11:08:05 GMT 2012 Rank 44 Aligned Residues 210 % Identity 16% Template c2znjB_ PDB info PDB header:ligase Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of pyrrolysyl-trna synthetase from2 desulfitobacterium hafniense Resolution 2.50 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	L	S	Q	F	M	L	D	L	H	T	E	Q	H	G	Y	S	E	N	Y	V	P	Y	L	V	N	Q	D	T	L	Y	G	T	G	Q	L	P	K	F	A	G	D	L	F	H	T	R	P	L	E	E	E	A	D	T	S	N	Y	A	L	I	P	T	A	E	V	P	L	T	N	L	V	R	G	E	I	I	D	E
Query Conservation
Alig confidence													.																																									.	.	.	.	.	.																		.
Template Conservation													.																																									.	.	.	.	.	.																		.
Template Sequence		L	E	L	E	E	K	L	A	K	A	L	.	H	Q	Q	G	F	V	Q	V	V	T	P	T	I	I	T	K	S	A	L	A	K	M	T	I	G	E	D	H	P	L	F	S	Q	V	F	W	L	D	G	K	.	.	.	.	.	.	K	C	L	R	P	M	L	A	P	N	L	Y	T	L	W	R	E	.	L	E	R	L
Template Known Secondary structure													.			T	T								S									T	T	T		S	S	S	S	T					S		B	S	S	S	S	.	.	.	.	.	.					S	S	S											.			T	T
Template Predicted Secondary structure													.																																									.	.	.	.	.	.																		.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		D	D	L	P	I	K	M	T	A	H	T	P	C	F	R	S	E	A	G	S	Y	G	R	D	T	R	G	L	I	R	M	H	Q	F	D	K	V	E	M	V	Q	I	V	R	P	E	D	S	M	A	A	L	E	E	M	T	G	H	A	E	K	V	L	Q	L	L	G	L	.	P	Y	R	K	I	I	L	C	T	G	D
Query Conservation																																																																						.
Alig confidence																								.	.	.	.	.	.	.															.	.																								.						.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.															.	.																														.	.	.	.	.	.
Template Sequence		W	D	K	P	I	R	I	F	E	I	G	T	C	Y	R	K	E	S	Q	G	A	Q	.	.	.	.	.	.	.	H	L	N	E	F	T	M	L	N	L	T	E	L	G	.	.	T	P	L	E	E	R	H	Q	R	L	E	D	M	A	R	W	V	L	E	A	A	G	I	R	E	F	E	L	V	.	.	.	.	.	.
Template Known Secondary structure		S		S	S													S			S	S		.	.	.	.	.	.	.			S											T	.	.			G	G	G																	T								.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.															.	.																														.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.								.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	F	G	A	C	K	T	Y	D	L	E	V	W	I	P	A	Q	N	T	Y	R	E	I	S	S	C	S	N	V	W	D	F	Q	A	R	R	M	Q	A	R	C	R	S	K	S	D	K	K	T	R	L	V	H	T	L	N	G	S	G	L	A	V	G	R	T	L	V	A	V	M	E	N	Y	Q	Q	A	D	G	R
Query Conservation
Alig confidence																	.	.	.	.																								.	.	.	.	.	.	.	.	.	.							.	.												.	.	.	.					.
Template Conservation																	.	.	.	.																								.	.	.	.	.	.	.	.	.	.							.	.												.	.	.	.					.
Template Sequence		T	E	S	S	V	V	Y	G	D	T	V	D	V	M	K	.	.	.	.	G	D	L	E	L	A	S	G	A	M	G	P	H	F	L	D	E	K	W	E	I	F	D	.	.	.	.	.	.	.	.	.	.	P	W	V	G	L	G	.	.	F	G	L	E	R	L	L	M	I	R	E	.	.	.	.	G	T	Q	H	.
Template Known Secondary structure						S	S	S	S								.	.	.	.	T	T										S		T	T	T	T	T	T	T			S	.	.	.	.	.	.	.	.	.	.							.	.												.	.	.	.	T		S		.
Template Predicted Secondary structure																	.	.	.	.																								.	.	.	.	.	.	.	.	.	.							.	.												.	.	.	.					.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.											.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.					.	.	.	.
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	V	P	E	V	L	R	P	Y	M	N	G	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	S	M	A	R	S	L	S	Y	L	D	G	V	R
Template Known Secondary structure		G	G	G	G	S	S		S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions