Job Description P0A8L1 Confidence 99.56% Date Thu Jan 5 11:08:05 GMT 2012 Rank 43 Aligned Residues 188 % Identity 21% Template c2zimA_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyrrolysyl-trna synthetase; PDBTitle: pyrrolysyl-trna synthetase bound to adenylated pyrrolysine and2 pyrophosphate Resolution 2.10 Å

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	H	R	A	L	S	Q	F	M	L	D	L	H	T	E	Q	H	G	Y	S	E	N	Y	V	P	Y	L	V	N	Q	D	T	L	Y	G	T	G	Q	L	P	K	F	A	G	D	L	F	H	T	R	P	L	E	E	E	A	D	T	S	N	Y	A	L	I	P	T	A	E	V	P	L	T	N	L	V	R	G	E	I	I
Query Conservation
Alig confidence															.																																			.	.	.	.	.	.	.	.	.
Template Conservation															.																																			.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	G	K	L	E	R	E	I	T	R	F	F	.	V	D	R	G	F	L	E	I	K	S	P	I	L	I	P	L	E	Y	I	E	R	M	G	I	D	E	L	S	K	Q	I	F	R	V	.	.	.	.	.	.	.	.	.	D	K	N	F	C	L	R	P	M	L	A	P	N	L	Y	N	Y	L	R	K	L	D	R
Template Known Secondary structure															.			T	T								S				T						T	T					G	G	G					.	.	.	.	.	.	.	.	.	T	T	T					S		S												T	T
Template Predicted Secondary structure															.																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.										.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	D	D	L	P	I	K	M	T	A	H	T	P	C	F	R	S	E	A	G	S	Y	G	R	D	T	R	G	L	I	R	M	H	Q	F	D	K	V	E	M	V	Q	I	V	R	P	E	D	S	M	A	A	L	E	E	M	T	G	H	A	E	K	V	L	Q	L	L	G	L	P	Y	R	K	I	I	L	C	T	G
Query Conservation
Alig confidence						.																				.	.	.	.	.	.	.																			.	.	.	.
Template Conservation						.																				.	.	.	.	.	.	.																			.	.	.	.
Template Sequence		A	L	P	D	.	P	I	K	I	F	E	I	G	P	C	Y	R	K	E	S	D	G	K	E	.	.	.	.	.	.	.	H	L	E	E	F	T	M	L	N	F	C	Q	M	G	S	G	C	T	.	.	.	.	R	E	N	L	E	S	I	I	T	D	F	L	N	H	L	G	I	D	F	K	I	V	G	D	S	C	M
Template Known Secondary structure		T	S		S	.	S														S			S	S	.	.	.	.	.	.	.			S											S	T	T			.	.	.	.																T											T
Template Predicted Secondary structure						.																				.	.	.	.	.	.	.																			.	.	.	.
Template SS confidence
		315	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.								.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.					.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	G	F	G	A	C	K	T	Y	D	L	E	V	W	I	P	A	Q	N	T	Y	R	E	I	S	S	C	S	N	V	W	D	F	Q	A	R	R	M	Q	A	R	C	R	S	K	S	D	K	K	T	R	L	V	H	T	L	N	G	S	G	L	A	V	G	R	T	L	V	A	V	M
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	G	D	T	.	.	.	.	.	.	.	.	.	.	L	D	V	M	H	G	D	L	E	L	S	S	A	V	V	G	P	I	P	L	D	R	E	W	G	I	D	K	.	.	.	.	.	.	.	.	.	.	.	.	P	W	I	G	A	G	F	G	L	E	R	L	L	K	V	K	H
Template Known Secondary structure		T	T				.	.	.	.	.	.	.	.	.	.						T	T									S			G	G	G	G	G	G	T			S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		383	.	.	.	.											.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.													.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions