Job Description P0A8L1 Confidence 35.83% Date Thu Jan 5 11:08:05 GMT 2012 Rank 117 Aligned Residues 55 % Identity 16% Template c2p4vA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor greb; PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution Resolution 2.60 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure															.																		.	.	.	.	.
Query SS confidence															.																		.	.	.	.	.
Query Sequence		R	K	V	L	Q	V	K	T	E	N	L	Q	A	.	E	R	N	S	R	S	K	S	I	G	Q	A	K	A	R	G	E	.	.	.	.	.	D	I	E	P	L	R	L	E	V	N	K	L	G	E	E	L	D	A	A	K	A	E	L	D	A
Query Conservation															.																		.	.	.	.	.
Alig confidence															.																		.	.	.	.	.
Template Conservation
Template Sequence		Y	E	K	L	K	Q	E	L	N	Y	L	W	R	E	E	R	P	E	V	T	K	K	V	T	W	A	A	S	L	G	D	R	S	E	N	A	D	Y	Q	Y	N	K	K	R	L	R	E	I	D	R	R	V	R	Y	L	T	K	C	M	E	N
Template Known Secondary structure															T																S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions