Job Description P0A8L1 Confidence 99.10% Date Thu Jan 5 11:08:05 GMT 2012 Rank 52 Aligned Residues 220 % Identity 16% Template c2du4B_ PDB info PDB header:ligase/rna Chain: B: PDB Molecule:o-phosphoseryl-trna synthetase; PDBTitle: crystal structure of archaeoglobus fulgidus o-phosphoseryl-2 trna synthetase complexed with trnacys Resolution 2.80 Å

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.
Predicted Secondary structure																																																										.	.															.	.	.
Query SS confidence																																																										.	.															.	.	.
Query Sequence		A	A	A	V	K	L	T	G	S	R	F	V	V	M	K	G	Q	I	A	R	M	H	R	A	L	S	Q	F	M	L	D	L	H	T	E	Q	H	G	Y	S	E	N	Y	V	P	Y	L	V	N	Q	D	T	L	Y	G	T	.	.	G	Q	L	P	K	F	A	G	D	L	F	H	T	R	.	.	.	P	L	E	E	E
Query Conservation																																																										.	.															.	.	.
Alig confidence																													.							.																						.	.															.	.	.
Template Conservation																													.							.
Template Sequence		E	R	S	P	N	E	L	Y	P	R	V	G	F	S	F	G	K	E	H	P	L	F	A	T	I	Q	R	.	L	R	E	A	Y	L	.	S	I	G	F	S	E	V	V	N	P	L	I	V	E	D	V	H	V	K	K	Q	F	G	R	E	A	L	A	V	L	D	R	C	F	Y	L	A	T	L	P	K	P	N	L	K
Template Known Secondary structure					G	G	G	S	T	T	S	S																	.							.	T	T	T												T								T	T	T					G	G	G	S
Template Predicted Secondary structure																													.							.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																														.																																			.
Query SS confidence																																														.																																			.
Query Sequence		A	D	T	S	N	Y	A	L	I	P	T	A	E	V	P	L	T	N	L	V	R	G	E	I	I	D	E	D	D	L	P	I	K	M	T	A	H	T	P	C	F	R	S	E	.	A	G	S	Y	G	R	D	T	R	G	L	I	R	M	H	Q	F	D	K	V	E	M	V	Q	I	V	R	P	E	D	S	M	A	A	.
Query Conservation																																														.																																			.
Alig confidence											.																																			.						.	.	.	.	.	.	.																.	.	.	.	.			.
Template Conservation											.																																									.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		P	I	S	S	T	L	T	L	R	.	S	H	M	T	T	G	W	F	I	T	L	S	H	I	A	D	K	L	P	L	P	I	K	L	F	S	I	D	R	C	F	R	R	E	Q	G	E	D	A	T	.	.	.	.	.	.	.	R	L	Y	T	Y	F	S	A	S	C	V	L	V	D	E	.	.	.	.	.	E	L	S
Template Known Secondary structure											.	S	S	T									T	T	T	T	T	T	S		S															T	T		T	T	T	.	.	.	.	.	.	.			S												S	.	.	.	.	.	S
Template Predicted Secondary structure											.																																									.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.								.	.	.	.	.	230	.	.	.	.	.	.	.	.	.						240	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350									.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																				.																													.	.	.	.	.	.	.	.
Query SS confidence																				.																													.	.	.	.	.	.	.	.
Query Sequence		L	E	E	M	T	G	H	A	E	K	V	L	Q	L	L	G	L	P	.	Y	R	K	I	I	L	C	T	G	D	M	G	F	G	A	C	K	T	Y	D	L	E	V	W	I	P	A	Q	.	.	.	.	.	.	.	.	N	T	Y	R	E	I	S	S	C	S	N	V	W	D	F	Q	A	R	R	M	Q	A	R	C	R
Query Conservation																				.																													.	.	.	.	.	.	.	.
Alig confidence																				.																													.	.	.	.	.	.	.	.																								.	.
Template Conservation																																																																																.	.
Template Sequence		V	D	D	G	K	A	V	A	E	A	L	L	R	Q	F	G	F	E	N	F	R	F	R	K	D	E	K	R	S	K	Y	Y	I	P	D	T	Q	T	E	V	F	A	F	H	P	K	L	V	G	S	S	T	K	Y	S	D	G	W	I	E	I	A	T	F	G	I	Y	S	P	T	A	L	A	E	Y	D	I	P	.	.
Template Known Secondary structure															T	T	T										T	T			T	T	B		T	T	T													T		S	S	T	T	T												B							T	T	T			.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	S	D	K	K	T	R	L	V	H	T	L	N	G	S	G	L	A	V	G	R	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	Y	P	V	M	N	L	G	L	G	V	E	R	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												321	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions