Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8L1
Confidence100.00%DateThu Jan 5 11:08:05 GMT 2012
Rank9Aligned Residues310
% Identity20%Templatec2cj9A_
PDB info PDB header:ligaseChain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of methanosarcina barkeri seryl-trna2 synthetase complexed with an analog of seryladenylate
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.........120...... ...130.........140.........150.........160.........170...
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Query Sequence  IALTIPNLPADEVPVGKDENDNVEVSRW. . . . . GTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMH
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Template Sequence  EAEMKNRVPDRILTLLEEKIEAAKAEHWNLLWQREPMEHPFKEDPTQAMMKEGWLKRG. . . . . . SSRGQWIHGPQSARIF
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   137..140.........150.........160.........170.........180.........190.... .....200.........210
 
   174.....180.........190.........200.........210.........220.......
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Query Sequence  RALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEA. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RTFEKIVLEELLEPLGYREMIFPKLVTWEVWMKSGHAKGVYPEIYYVCPPQTRDPDYWEEVADYYKVTHEVPTKLIKEKI
Template Known Secondary structure  TTTTTT




SSGGGT
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B
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   215....220.........230.........240.........250.........260.........270.........280.........290....
 
   228.230.........240.........250.........260..... ....270.........280.........290.........300......
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Query Sequence  DTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTP. CFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALE
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Template Sequence  AEPIGGMCYAQCPPFWMYVAGETLPNEEIPVKVFDRSGTSHRYESGG. . . . IHGIERVDEFHRIEIVWIGTKEEVLKCAE
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SSSSGGGGGGTTT

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   295....300.........310.........320.........330.........340. ........350.........360.........370
 
   307..310........ .320.........330. ........340........ .350.........360.........370...
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Query Sequence  EMTGHAEKVLQL. LGLPYRKIILCTG. . . . . . . . . DMGFGACKTYDLEVWIP. . . AQNTYREISSCSNVWDFQARRMQAR
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Template Sequence  ELHDRYMHIFNDILDIEWRKARVTPWFMAQEGLLGLAEENTVGTTDYEACLPYRGPDGEWLEFQNVSINGDKYPKGFNVK
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   371........380.........390.........400.........410.........420.........430.........440.........450
 
   374.....380.........390.........400.........410.........420......
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Query Sequence  CRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGL
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Template Sequence  LQSGD. . . . . ELWS. GCSGVGLERWAAVFLAQKGLDPA. . NWPEEFRNRVGEM
Template Known Secondary structure  TT

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   451.... .... 460.........470.........480.. .......490.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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