Job Description P0A8L1 Confidence 100.00% Date Thu Jan 5 11:08:05 GMT 2012 Rank 16 Aligned Residues 296 % Identity 21% Template c1nyqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:threonyl-trna synthetase 1; PDBTitle: structure of staphylococcus aureus threonyl-trna synthetase2 complexed with an analogue of threonyl adenylate Resolution 3.20 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.													.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	V	P	V	G	K	D	E	N	D	N	V	E	V	S	R	W	G	T	P	R	E	F	D	F	E	V	.	.	.	.	.	.	.	.	.	.	.	.	R	D	H	V	T	L	G	E	M	H	S	G	L	D	F	A	A	A	V	K	L	T	G	S	R	F	V	V	M	K	G	Q	I	A	R	M	H	R	A	L
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																																																													.	.	.
Template Sequence		A	G	A	Y	W	R	G	D	S	N	N	K	M	L	Q	R	I	Y	G	T	A	F	F	D	K	K	E	L	K	A	H	L	Q	M	L	E	E	R	K	E	R	D	H	R	K	I	G	K	E	L	E	L	F	T	N	S	Q	L	V	.	.	.	G	A	G	L	P	L	W	L	P	N	G	A	T	I	R	R	E	I
Template Known Secondary structure				B		S	T	T		T	T	S			B									S	S																										T	T						T	T	T	.	.	.		T	T
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	F	M	L	D	L	H	T	E	Q	H	G	Y	S	E	N	Y	V	P	Y	L	V	N	Q	D	T	L	Y	G	T	G	Q	L	P	K	F	A	G	D	L	F	H	T	R	P	L	E	E	E	A	D	T	S	N	Y	A	L	I	P	T	A	E	V	P	L	T	N	L	V	R	G	E	I	I	D	E	D	D	L
Query Conservation
Alig confidence										.																																										.	.	.
Template Conservation										.																																										.	.	.
Template Sequence		E	R	Y	I	V	D	K	E	.	V	S	M	G	Y	D	H	V	Y	T	P	V	L	A	N	V	D	L	Y	K	T	S	G	H	W	D	H	Y	Q	E	D	M	F	P	P	M	Q	L	D	E	T	.	.	.	E	S	M	V	L	R	P	M	N	C	P	H	H	M	M	I	Y	A	N	K	P	H	S	Y	R	E	L
Template Known Secondary structure										.			T	T								S				T							T	S	T	T	T	T	T	T	T	S				B		S	T	T	S	.	.	.							S		S										T	S			B	T	T	T
Template Predicted Secondary structure										.																																										.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	K	M	T	A	H	T	P	C	F	R	S	E	A	G	S	Y	G	R	D	T	R	G	L	I	R	M	H	Q	F	D	K	V	E	M	V	Q	I	V	R	P	E	D	S	M	A	A	L	E	E	M	T	G	H	A	E	K	V	L	Q	L	L	G	L	P	Y	R	K	I	I	L	C	T	G	D	M	G	F	G
Query Conservation
Alig confidence																						.	.	.
Template Conservation																						.	.	.
Template Sequence		P	I	R	I	A	E	L	G	T	M	H	R	Y	E	A	S	G	A	V	S	.	.	.	G	L	Q	R	V	R	G	M	T	L	N	D	S	H	I	F	V	R	P	D	Q	I	K	E	E	F	K	R	V	V	N	M	I	I	D	V	Y	K	D	F	G	F	E	D	Y	S	F	R	L	S	Y	R	D	P	E	D	K
Template Known Secondary structure		S															T	T	T		B	.	.	.	T	T	T	B		S													G	G	G																			T	T					B								S
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.				.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
		337	.	.																																						340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query Sequence		A	C	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Y	D	L	E	V	W	I	P	A	Q	N	T	Y	R	E	I	S	S	C	S	N	V	W	D	F	Q	.	A	R	R	M	Q	A	R	C	R	S	K	S
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.															.	.					.
Template Conservation																																																.															.	.
Template Sequence		E	K	Y	F	D	D	D	D	M	W	N	K	A	E	N	M	L	K	E	A	A	D	E	L	G	L	S	Y	E	E	A	I	G	E	A	A	F	Y	G	P	K	L	D	V	Q	V	.	K	T	A	M	G	K	E	E	T	L	S	T	A	Q	.	.	L	D	F	L	L	P	E	R	F	D	L	T	Y	I	G	Q	D
Template Known Secondary structure		S	S	S	S																					T								T		S	B	T	T	B								.			T	T	S										.	.			S	S					T	T						S	S
Template Predicted Secondary structure																																																.															.	.
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.		.	.	.	480	.	.	.	.	.	.	.	.	.	490			.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	K	T	R	L	V	H	T	L	N	G	S	G	L	A	V	G	R	T	L	V	A	V	M	E	N	Y	Q	Q	A	D	G	R	I	E	V	P	E	V	L	R	P	Y
Query Conservation
Alig confidence																																	.	.	.	.	.
Template Conservation																																	.	.	.	.	.
Template Sequence		G	E	H	H	R	P	V	V	I	H	R	G	V	V	S	T	M	E	R	F	V	A	F	L	T	E	E	T	K	G	A	.	.	.	.	.	F	P	T	W	L	A	P	K
Template Known Secondary structure		S																												T	T		.	.	.	.	.			T	T	T		S	S
Template Predicted Secondary structure																																	.	.	.	.	.
Template SS confidence
		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.						.	540	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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