Job Description P0A8L1 Confidence 100.00% Date Thu Jan 5 11:08:05 GMT 2012 Rank 21 Aligned Residues 268 % Identity 20% Template c1nj8C_ PDB info PDB header:ligase Chain: C: PDB Molecule:proline-trna synthetase; PDBTitle: crystal structure of prolyl-trna synthetase from2 methanocaldococcus janaschii Resolution 3.20 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		T	L	G	E	M	H	S	G	L	D	F	A	A	A	V	K	L	T	G	S	R	F	V	V	M	K	G	Q	I	A	R	M	H	R	A	L	S	Q	F	M	L	D	L	H	T	E	Q	H	G	Y	S	E	N	Y	V	P	Y	L	V	N	Q	D	T	L	Y	G	.	T	G	Q	L	P	K	F	A	G	D	L	F	H
Query Conservation																																																																				.
Alig confidence																	.	.	.	.																										.																						.
Template Conservation																	.	.	.	.																										.
Template Sequence		D	I	L	E	K	A	E	I	Y	D	V	R	Y	P	I	.	.	.	.	K	G	C	G	V	Y	L	P	Y	G	F	K	I	R	R	Y	T	F	E	I	I	R	N	L	L	.	D	E	S	G	H	D	E	A	L	F	P	M	L	I	P	E	D	L	L	A	K	E	A	E	H	I	K	G	F	E	D	E	V	Y	W
Template Known Secondary structure							T	S	S		B			S	T	T	.	.	.	.	S	S			B																					.			T	T								S												S	S	S	G	G	G	G	G	G
Template Predicted Secondary structure																	.	.	.	.																										.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.		.	.	.	.
Predicted Secondary structure																																																																								.					.
Query SS confidence																																																																								.					.
Query Sequence		T	R	P	L	E	E	E	A	D	T	S	N	Y	A	L	I	P	T	A	E	V	P	L	T	N	L	V	R	G	E	I	I	D	E	D	D	L	P	I	K	M	T	A	H	T	P	C	F	R	S	E	A	G	S	Y	G	R	D	T	R	G	L	I	R	M	H	Q	F	D	K	.	V	E	M	V	.	Q	I	V	R
Query Conservation																																																																								.					.
Alig confidence																																																						.	.	.	.															.					.
Template Conservation																																																						.	.	.	.
Template Sequence		V	T	H	G	G	K	T	Q	L	D	V	K	L	A	L	R	P	T	S	E	T	P	I	Y	Y	M	M	K	L	W	V	K	V	H	T	D	L	P	I	K	I	Y	Q	I	V	N	T	F	R	Y	E	T	.	.	.	.	K	H	T	R	P	L	I	R	L	R	E	I	M	T	F	K	E	A	H	T	A	H	S	T
Template Known Secondary structure					S	S	S	S										S	S	S										T	T			B	T	T	S																	.	.	.	.	S			B	T	T	T	B		S	S		S										S	S
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	D	S	M	A	A	L	E	E	M	T	G	H	A	E	K	V	L	Q	L	L	G	L	P	Y	R	K	I	I	L	C	T	G	D	M	G	F	G	A	C	K	T	Y	D	L	E	V	W	I	P	A	Q	N	T	Y	R	E	I	S	S	C	S	N	V	W	D	F	Q	A	R	R	M	Q	A	R	C	R	S	K
Query Conservation
Alig confidence																																																					.
Template Conservation																																																					.
Template Sequence		K	E	E	A	E	N	Q	V	K	E	A	I	S	I	Y	K	K	F	F	D	T	L	G	I	P	Y	L	I	S	K	R	P	E	W	D	K	F	P	G	A	E	Y	T	M	A	F	D	T	I	F	P	.	D	G	R	T	M	Q	I	A	T	V	H	N	L	G	Q	N	F	S	K	T	F	E	I	I	F	E	T	P
Template Known Secondary structure																								T										T	T	S			T	T		S										T	.	T	S													T						T	T						T
Template Predicted Secondary structure																																																					.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	K	K	T	R	L	V	H	T	L	N	G	S	G	L	A	V	G	R	T	L	V	A	V	M	E	N	Y	Q	Q	A	D	G	R	I	E	V	P	E	V	L	R	P	Y
Query Conservation
Alig confidence																	.	.	.																	.
Template Conservation																	.	.	.																	.
Template Sequence		T	G	D	K	D	Y	A	Y	Q	T	C	Y	G	I	S	.	.	.	D	R	V	I	A	S	I	I	A	I	H	G	D	E	K	G	.	L	I	L	P	P	I	V	A	P	I
Template Known Secondary structure		T	S	S													.	.	.	T												B	T	T	B	.					T	T	S		S	S
Template Predicted Secondary structure																	.	.	.																	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions