Job Description P0A8L1 Confidence 100.00% Date Thu Jan 5 11:08:05 GMT 2012 Rank 22 Aligned Residues 258 % Identity 17% Template c1h4tD_ PDB info PDB header:aminoacyl-trna synthetase Chain: D: PDB Molecule:prolyl-trna synthetase; PDBTitle: prolyl-trna synthetase from thermus thermophilus complexed2 with l-proline Resolution 2.9 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	G	E	M	H	S	G	L	D	F	A	A	A	V	K	L	T	G	S	R	F	V	V	M	K	G	Q	I	A	R	M	H	R	A	L	S	Q	F	M	L	D	L	H	T	E	Q	H	G	Y	S	E	N	Y	V	P	Y	L	V	N	Q	D	T	L	Y	G	T	G	Q	L	P	K	F	A	G	D	L	F	H	T
Query Conservation
Alig confidence																.	.	.	.	.																										.																				.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.																										.																				.	.	.	.	.	.	.	.
Template Sequence		E	V	I	Q	K	A	E	L	A	D	Y	G	P	V	.	.	.	.	.	R	G	T	I	V	V	R	P	Y	G	Y	A	I	W	E	N	I	Q	Q	V	L	D	R	M	F	.	K	E	T	G	H	Q	N	A	Y	F	P	L	F	I	P	M	S	F	L	.	.	.	.	.	.	.	.	F	S	P	E	L	A	V	V
Template Known Secondary structure							T	T	S					S	S	.	.	.	.	.	T	T																								.			T	T								S				G	G	G		.	.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure																.	.	.	.	.																										.																				.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.									.	.	80	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		R	P	L	E	E	E	A	D	T	S	N	Y	A	L	I	P	T	A	E	V	P	L	T	N	L	V	R	G	E	I	I	D	E	D	D	L	P	I	K	M	T	A	H	T	P	C	F	R	S	E	A	G	S	Y	G	R	D	T	R	G	L	I	R	M	H	Q	F	D	K	V	E	M	V	.	Q	I	V	R	P	E
Query Conservation																																																																											.
Alig confidence																																																				.	.	.	.	.																			.
Template Conservation																																																				.	.	.	.	.
Template Sequence		T	H	A	G	G	E	E	L	E	E	P	L	A	V	R	P	T	S	E	T	V	I	G	Y	M	W	S	K	W	I	R	S	W	R	D	L	P	Q	L	L	N	Q	W	G	N	V	V	R	W	E	.	.	.	.	.	M	R	T	R	P	F	L	R	T	S	E	F	L	W	Q	E	G	H	T	A	H	A	T	R	E
Template Known Secondary structure					T	T											S																B	G	G	G																.	.	.	.	.	S	S		B	T	T	T	B		S												S	S
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		D	S	M	A	A	L	E	E	M	T	G	H	A	E	K	V	L	Q	L	.	L	G	L	P	Y	R	K	I	I	L	C	T	G	D	M	G	F	G	A	C	K	T	Y	D	L	E	V	W	I	P	A	Q	N	T	Y	R	E	I	S	S	C	S	N	V	W	D	F	Q	A	R	R	M	Q	A	R	C	R	S	K	S
Query Conservation																					.
Alig confidence																					.																															.
Template Conservation																																																				.
Template Sequence		E	A	E	E	E	V	R	R	M	L	S	I	Y	A	R	L	A	R	E	Y	A	A	I	P	V	I	E	G	L	K	T	E	K	E	K	F	A	G	A	V	Y	T	T	T	I	E	A	L	M	K	.	D	G	K	A	L	Q	A	G	T	S	H	Y	L	G	E	N	F	A	R	A	F	D	I	K	F	Q	D	R	D
Template Known Secondary structure																																	G	G	G	S		T	T		S										T	.	T	S													T						T	T						T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	K	T	R	L	V	H	T	L	N	G	S	G	L	A	V	G	R	T	L	V	A	V	M	E	N	Y	Q	Q	A	D	G	R	I	E	V	P	E	V	L	R	P	Y
Query Conservation
Alig confidence																.	.	.																	.
Template Conservation																.	.	.																	.
Template Sequence		L	Q	V	K	Y	V	H	T	T	S	W	G	L	S	.	.	.	W	R	F	I	G	A	I	I	M	T	H	G	D	D	R	G	.	L	V	L	P	P	R	L	A	P	I
Template Known Secondary structure		S														.	.	.	T												B	T	T	B	.					T	T	T		S
Template Predicted Secondary structure																.	.	.																	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions