 |
Job Description | P0A8L1 | Confidence | 90.90% | Date | Thu Jan 5 11:08:05 GMT 2012 |
Rank | 87 | Aligned Residues | 78 |
% Identity | 12% | Template | c1deqO_ |
PDB info |
PDB header: | PDB COMPND: | |
Resolution | UNK |
|
 |
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | L | E | E | R | R | K | V | L | Q | V | K | T | E | N | L | Q | A | E | R | N | S | R | S | K | S | I | G | Q | A | K | A | R | G | E | D | I | E | P | L | R | L | E | V | N | K | L | G | E | E | L | D | A | A | K | A | E | L | D | A | L | Q | A | E | I | R | D | I | A | L | T | I | P | N | L | P | A | D | E |
Query Conservation |   |
  |   |
|
|   |
|   |
|   |
|   |   |
|   |
|   |
|   |   |
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |
|   |
|   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |   |   |
|
|   |   |
|   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |
|   | . | . | . |
|   |
|   |   |
|
|   |   |
|   |   |   |
|   |
|
|   |
|
|   |   |   |
|   |
|
|   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
D | T | L | V | R | Q | E | R | P | I | R | K | S | I | E | D | L | R | N | T | V | D | S | V | S | R | T | S | S | S | T | F | . |
. |
. |
Q | Y | I | T | L | L | K | N | M | W | K | G | R | Q | N | Q | V | Q | D | N | E | N | V | V | N | E | Y | S | S | H | L | E | K | H | Q | L | Y | I | D | E | T | V | K | N | N |
Template Known Secondary structure |   |
 |  |  | T | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | T | T | T | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | |
|
|
. | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
  |
  |   |
111 |
Predicted Secondary structure |   |
|
Query SS confidence |   |
|
Query Sequence |   |
V |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
I |
Template Known Secondary structure |   |
S |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
168 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|