Job Description P76272 Confidence 18.01% Date Thu Jan 5 12:21:28 GMT 2012 Rank 31 Aligned Residues 142 % Identity 15% Template c2r6vA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:uncharacterized protein ph0856; PDBTitle: crystal structure of fmn-binding protein (np_142786.1) from pyrococcus2 horikoshii at 1.35 a resolution Resolution 1.25 Å

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		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																																																				.		.
Query SS confidence																																																				.		.
Query Sequence		Q	G	L	E	V	G	Q	L	T	K	L	D	L	N	P	G	G	K	V	T	G	E	M	T	V	D	P	S	V	V	T	L	L	R	E	N	T	R	I	E	L	R	N	P	K	L	S	L	S	D	.	A	.	N	L	S	A	L	L	T	G	K	T	F	E	L	V	P	G	D	G	E	P	R	K	E	F	V	V	V
Query Conservation																																																				.		.
Alig confidence																	.																																			.		.					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	X	A	A	D	W	V	T	V	V	S	F	D	P	.	F	I	V	G	V	A	V	A	P	K	R	T	T	H	K	L	I	K	K	Y	G	E	F	V	I	S	V	P	S	L	D	V	L	R	D	V	W	I	A	G	T	.	.	.	.	.	.	.	.	.	.	.	K	K	G	P	S	K	L	K	E	X	S	V
Template Known Secondary structure														T	T	T	.	T								T	T	S										S								B	G	G	G								T	T	.	.	.	.	.	.	.	.	.	.	.	S		S	G	G	G	G	G	G	S
Template Predicted Secondary structure																	.																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.												80	.	.	.	.	.	.	.	.	.	90	.
		381	.	.	.	.				.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure							.	.	.																																																														.
Query SS confidence							.	.	.																																																														.
Query Sequence		P	G	E	K	A	.	.	.	L	L	H	E	P	D	V	L	T	L	T	L	T	A	P	E	S	Y	G	I	D	A	G	Q	P	L	I	L	H	G	V	Q	V	G	Q	V	I	D	R	K	L	T	S	K	G	V	T	F	T	V	A	I	E	P	Q	H	R	E	L	V	K	.	G	D	S	K	F	V	V	N	S	R
Query Conservation							.	.	.																																																														.
Alig confidence							.	.	.																											.	.	.	.																		.														.
Template Conservation																																				.	.	.	.																		.
Template Sequence		T	L	I	P	S	K	K	V	K	V	P	S	I	E	E	A	L	A	N	I	E	C	R	V	I	D	A	R	S	Y	G	D	H	T	.	.	.	.	F	F	V	G	E	V	V	G	Y	T	Y	K	D	Y	A	F	E	.	K	G	K	P	N	L	K	A	K	F	L	A	H	V	S	W	S	E	F	V	T	F	S	E
Template Known Secondary structure							S	S	S	S	S				T	T	S	S														T	T			.	.	.	.													G	G	G	G	T	.	T	S	S			G	G	G		B						T	T							S
Template Predicted Secondary structure																																				.	.	.	.																		.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		457	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	V	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	H	K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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