Job Description P76272 Confidence 90.84% Date Thu Jan 5 12:21:28 GMT 2012 Rank 3 Aligned Residues 130 % Identity 20% Template c2j5uB_ PDB info PDB header:cell shape regulation Chain: B: PDB Molecule:mrec protein; PDBTitle: mrec lysteria monocytogenes Resolution 2.5 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	T	L	T	A	P	E	S	Y	G	I	D	A	G	Q	P	L	I	L	H	G	V	Q	V	G	Q	V	I	D	R	K	L	T	S	K	G	V	T	F	T	V	A	I	E	P	Q	H	R	E	L	V	K	G	D	S	K	F	V	V	N	S	R	V	D	V	K	V	G	L	D	G	V	E	F	L	G	A	S	A
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Sequence		Q	V	E	I	D	K	G	S	S	D	G	V	K	P	D	M	A	V	T	T	P	S	G	L	I	G	K	V	T	T	T	G	A	K	S	A	T	V	E	L	.	.	.	.	.	.	.	.	.	.	L	T	S	S	D	V	K	N	R	V	S	A	K	V	Q	G	K	E	N	A	F	G	I	.	.	.	.	.	.	.
Template Known Secondary structure						S			G	G	G	T			T	T						T	T											S	S							.	.	.	.	.	.	.	.	.	.	T	T				T	T									S	S	S						.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.											.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	W	I	N	G	G	I	R	I	L	P	G	D	K	G	E	M	K	A	S	Y	P	L	Y	A	N	L	E	K	A	L	E	N	S	L	S	D	L	P	T	T	T	V	S	L	S	A	E	T	L	P	D	V	Q	A	G	S	V	V	L	Y	R	K	F	E	V	G	E	V	I	T	V	R	P	R	A	N	A	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	I	N	G	Y	D	S	D	T	K	L	L	E	L	K	Q	L	P	Y	D	M	K	F	K	K	.	.	.	.	.	.	.	G	Q	K	V	V	T	S	G	L	G	G	.	.	.	.	.	.	.	.	K	F	P	A	G	I	F	I	G	T	I	E	K	V	E	T	D	K	M	G	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.						T	T	T	T									T	T	S				T	.	.	.	.	.	.	.	T								T	T	S	.	.	.	.	.	.	.	.	S	S		T	T													T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template SS confidence
											197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220								.	.	.	.	.	.	.	.	.	230	.									.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		554	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	D	L	H	I	K	P	E	Y	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	T	A	F	I	K	P	G	A	D
Template Known Secondary structure										S	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions