Return to main results Retrieve Phyre Job Id

Job DescriptionP76272
Confidence8.10%DateThu Jan 5 12:21:28 GMT 2012
Rank72Aligned Residues8
% Identity38%Templatec1icfB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protein (cathepsin l: light chain); PDBTitle: crystal structure of mhc class ii associated p41 ii fragment in2 complex with cathepsin l
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110..
Predicted Secondary structure 

Query SS confidence 







Query Sequence  ETQFWLVT
Query Conservation   
 



 
Alig confidence 







Template Conservation 
  




Template Sequence  NNKYWLVK
Template Known Secondary structure 


Template Predicted Secondary structure 


Template SS confidence 







   179180......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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