Job Description P76342 Confidence 100.00% Date Thu Jan 5 12:22:01 GMT 2012 Rank 6 Aligned Residues 248 % Identity 24% Template c2bpbA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite\:cytochrome c oxidoreductase subunit a; PDBTitle: sulfite dehydrogenase from starkeya novella Resolution 1.9 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	A	A	W	Q	N	N	L	P	L	T	P	A	D	K	V	S	G	Y	N	N	F	Y	E	F	G	L	D	K	A	D	P	A	A	N	A	G	S	L	K	T	D	P	W	T	L	K	I	S	G	E	V	A	K	P	L	T	L	D	H	D	D	L	T	R	R	F	P	L	E	E	R	I	Y	R	M	R	C	V
Query Conservation
Alig confidence																										.	.	.	.
Template Conservation																										.	.	.	.
Template Sequence		R	P	P	Q	L	E	T	P	F	S	V	F	D	E	G	L	I	T	P	N	D	A	F	F	.	.	.	.	V	R	Y	H	L	A	G	I	P	L	E	I	D	P	D	A	F	R	L	E	I	K	G	K	V	G	T	P	L	S	L	S	L	Q	D	L	K	N	D	F	P	A	S	E	V	V	A	V	N	Q	C	S
Template Known Secondary structure		T	T	T						G	G	G	G	G	S		S	S			G	G	G			.	.	.	.				S		S	B							T	T	T								S	B	S	S													S												T
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		148	.	150																		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	M	V	V	P	W	I	G	F	P	L	H	K	L	L	A	L	A	E	P	T	S	N	A	K	Y	V	A	F	E	T	I	Y	A	P	E	Q	M	P	G	Q	Q	D	R	F	I	G	G	G	L	K	Y	P	Y	V	E	G	L	R	L
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	N	S	R	G	F	V	E	P	R	V	G	G	G	Q	L	A	N	G	A	M	G	N	A	R	W	R	G	V	P	L	K	A	V	L	E	K	A	G	V	Q	A	G	A	K	Q	V	T	F	G	G	L	D	G	P	V	I	P	E	T	P	D	.	.	.	.	.	.	.	.	.	.	.	F	V	K	A	L	S	I
Template Known Secondary structure		T	T	T	G	G	G		S	S			S	S					T	T	S																				B		T	T									S		B		S	S	T	T	S			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.												.	.	170	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.										.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.
Query Sequence		D	E	A	M	H	P	L	T	L	M	T	V	G	V	Y	G	K	A	L	P	P	Q	N	G	A	P	V	R	L	I	V	P	W	K	Y	G	F	K	G	I	K	S	I	V	S	I	K	L	T	R	E	R	P	P	T	T	W	N	L	A	A	P	.	.	.	.	.	.	.	.	.	D	E	Y	G	F	Y	A	N	V
Query Conservation																																																																.	.	.	.	.	.	.	.	.
Alig confidence																																																																.	.	.	.	.	.	.	.	.						.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		D	H	A	T	D	G	E	V	M	L	A	Y	S	M	N	G	A	D	L	P	W	L	N	G	Y	P	L	R	L	V	V	P	G	Y	Y	G	T	Y	W	V	K	H	L	N	E	I	T	V	I	D	K	E	F	D	G	F	W	M	K	T	A	Y	R	I	P	D	N	A	C	A	C	T	E	P	G	K	.	.	.	.
Template Known Secondary structure					T	S	S		S							T	T					G	G	G	T	T	T						T	T	B		G	G	G	S		B	S								S	S									T	S	S				S	S	T	T	S				T	T		.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.					.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		N	P	Y	V	D	H	P	R	W	S	Q	A	T	E	R	F	I	G	S	G	G	I	L	D	V	Q	R	Q	P	T	L	L	F	N	G	Y	A	.	.	.	.	A	Q	V	A	S	L	Y	R	G	L	D	L	R	E	N	F
Query Conservation																																							.	.	.	.
Alig confidence																																							.	.	.	.
Template Conservation
Template Sequence		A	P	T	A	T	I	P	I	N	R	F	D	V	R	S	F	I	T	N	V	E	N	G	A	S	V	K	A	G	E	V	P	L	R	G	I	A	F	D	G	G	Y	G	I	T	Q	V	S	V	S	A	D	A	G	K	S	W
Template Known Secondary structure				S	S						B									S			T	T					S												S	S	S									S	S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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