Job Description P76342 Confidence 100.00% Date Thu Jan 5 12:22:01 GMT 2012 Rank 5 Aligned Residues 256 % Identity 19% Template c2bihA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nitrate reductase [nadph]; PDBTitle: crystal structure of the molybdenum-containing nitrate2 reducing fragment of pichia angusta assimilatory nitrate3 reductase Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		P	P	A	P	A	G	K	A	L	E	F	S	K	P	A	A	W	Q	N	N	.	L	P	L	T	P	A	D	K	V	S	G	Y	N	N	F	Y	E	F	G	L	D	K	A	D	P	A	A	N	A	G	S	L	K	T	D	P	W	T	L	K	I	S	G	E	V	A	K	P	L	T	L	D	H	D	D	L	T	R	R
Query Conservation																						.
Alig confidence																						.																									.	.	.
Template Conservation																																															.	.	.
Template Sequence		A	R	D	P	D	L	L	R	L	T	G	S	H	P	F	N	S	E	P	P	L	T	K	L	Y	D	S	G	F	L	T	P	V	S	L	H	F	V	R	N	H	G	P	V	P	.	.	.	Y	V	P	D	E	N	I	L	D	W	E	V	S	I	E	G	M	V	E	T	P	Y	K	I	K	L	S	D	I	M	E	Q
Template Known Secondary structure					T	T	S			S	S	T	T	S	S													T		S	S			G	G	G	S					S	S				.	.	.				T	T	T	G	G	G								S	B	S	S
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.				.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.																150	.					.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.
Query Sequence		F	P	L	E	E	R	I	Y	R	M	R	C	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	S	.	.	.	.	M	V	V	P	W	I	G	F	P	L	H	K	L	L	A	L	A	E	P	T	S	N	A	K	Y	V	A	F	E	T	I	Y	A	P	E	Q	M	P	G	Q	Q	D	R	F
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.																																							.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		F	D	I	Y	S	T	P	V	T	M	V	C	A	G	N	R	R	K	E	Q	N	M	V	K	K	G	A	G	F	N	W	G	A	A	G	T	S	T	S	L	W	T	G	C	M	L	G	D	V	I	G	K	A	R	P	S	K	R	A	R	F	V	W	M	E	G	A	D	N	P	A	N	G	A	.	.	.	.	.	.
Template Known Secondary structure		S												T	T	T	T								S			S	S					S																				T		B		T	T									S				T	T	S	S	.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		I	G	G	G	L	K	Y	P	Y	V	E	G	L	R	L	D	E	A	M	H	P	.	.	L	T	L	M	T	V	G	V	Y	G	K	A	L	P	P	Q	N	G	A	P	V	R	L	I	V	P	W	K	Y	G	F	K	G	I	K	S	I	V	S	I	K	L	T	R	E	R	P	P	T	T	W	N	L	A	A	P	D
Query Conservation																							.	.
Alig confidence		.	.	.	.	.	.	.	.														.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	Y	G	T	C	I	R	L	S	W	C	M	D	P	E	R	C	I	M	I	A	Y	Q	Q	N	G	E	W	L	H	P	D	H	G	K	P	L	R	V	V	I	P	G	V	I	G	G	R	S	V	K	W	L	K	K	L	V	V	S	D	R	P	S	E	N	W	Y	H	Y	F	D	N	R
Template Known Secondary structure		.	.	.	.	.	.	.	.											T		T	T	T									T	T					G	G	G	T	T	T						T	T	B	B	G	G	G	S		S	S								S	S										S	S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		274																							.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	F	Y	A	N	V	N	P	Y	V	D	H	P	R	W	S	Q	A	T	E	R	F	I	G	S	G	G	I	L	D	V	Q	R	Q	P	T	L	L	F	N	G	Y	A	A	Q	V	A	S	L	Y	R	G	L	D	L	R
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.												.	.
Template Conservation																																								.	.	.	.												.	.
Template Sequence		V	L	P	T	M	V	T	P	E	M	A	K	S	D	D	R	W	W	K	D	E	R	Y	A	I	Y	D	L	N	L	Q	T	I	I	C	K	P	E	.	.	.	.	N	Q	Q	V	I	K	I	S	E	D	E	.	.	Y	E	I	A	G	F	G	Y	N	G	G	G	V	R	I	G	R	I	E	V	S	L	D	K	G
Template Known Secondary structure					T	T								T		G	G	G	G	S		G	G	G	B			B										S		.	.	.	.	T	T							S			.	.										S	T	T										S	S	S	S
Template Predicted Secondary structure																																								.	.	.	.												.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.					.	.	.	.	.	.	.	.	320	.	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		332	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	W
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		348	.	350

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions