Job Description P37906 Confidence 100.00% Date Thu Jan 5 11:57:45 GMT 2012 Rank 7 Aligned Residues 358 % Identity 19% Template c3nyeA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-arginine dehydrogenase; PDBTitle: crystal structure of pseudomonas aeruginosa d-arginine dehydrogenase2 in complex with imino-arginine Resolution 1.30 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	T	C	D	V	C	V	V	G	G	G	Y	T	G	L	S	S	A	L	H	L	A	E	A	G	F	D	V	V	V	L	E	A	S	R	I	G	F	G	A	S	G	R	N	G	G	Q	L	V	N	S	Y	S	R	D	I	D	V	I	E	K	S	Y	G	M	D	T	A	R	M	L	G	S	M	M	F	E	G	G
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	E	A	D	Y	L	V	I	G	A	G	I	A	G	A	S	T	G	Y	W	L	S	A	H	G	R	V	V	V	L	E	R	E	A	Q	P	G	Y	H	S	T	G	R	S	A	A	H	Y	T	V	A	Y	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	V	R	A	L	T	A	A	S	R
Template Known Secondary structure													S											T	T	T	S							S	S	S	S	T	T	S	S	G	G	G	S	S						S	S		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1001	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.															.	.	.	.	1060	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		E	I	I	R	E	R	I	K	R	Y	Q	I	D	C	D	Y	R	P	G	G	L	F	V	A	M	N	D	K	Q	L	A	T	L	E	E	Q	K	E	N	W	E	R	Y	G	N	K	Q	L	E	L	L	D	A	N	A	I	R	R	E	V	A	.	.	.	S	D	R	Y	T	G	A	L	L	D	H	S	G	G	H	I
Query Conservation																																																															.	.	.
Alig confidence																																										.																					.	.	.
Template Conservation																																										.
Template Sequence		A	F	F	D	N	P	P	A	G	F	C	E	H	P	L	L	S	P	R	P	E	M	V	V	D	F	S	D	D	P	E	E	L	R	R	Q	Y	E	S	G	.	K	A	L	V	P	Q	M	R	L	L	D	A	E	Q	A	C	S	I	V	P	V	L	R	R	D	K	V	F	G	A	T	Y	D	P	T	G	A	D	I
Template Known Secondary structure						S			T	T	S		S	S		S											S	S														.					T	T													S	T	T	B		G	G	G								T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		1067	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.		.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.																															.	.
Query SS confidence																																						.																															.	.
Query Sequence		H	P	L	N	L	A	I	G	E	A	D	A	I	R	L	N	G	G	R	V	Y	E	L	S	A	V	T	Q	I	Q	H	T	T	P	A	V	.	V	R	T	A	K	G	Q	V	T	A	K	Y	V	I	V	A	G	N	A	Y	L	G	D	K	V	E	P	E	L	A	.	.	K	R	S	M	P	C	G	T	Q	V	I
Query Conservation																																						.																															.	.
Alig confidence																																						.																															.	.
Template Conservation
Template Sequence		D	T	D	A	L	H	Q	G	Y	L	R	G	I	R	R	N	Q	G	Q	V	L	C	N	H	E	A	L	E	I	R	R	V	D	G	A	W	E	V	R	C	D	A	G	S	Y	R	A	A	V	L	V	N	A	A	G	A	W	C	D	A	I	A	G	L	A	G	V	R	P	L	G	L	Q	P	K	R	R	S	A	F
Template Known Secondary structure																	T	T					S	S										T	T							S	S													G	G	G									T
Template Predicted Secondary structure
Template SS confidence
		1146	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		T	T	E	R	L	S	E	D	L	A	R	S	L	I	P	K	N	Y	C	V	E	D	C	N	Y	L	L	D	Y	Y	R	L	T	A	D	N	R	L	L	Y	G	G	G	.	.	.	V	V	Y	G	A	R	D	P	D	D	V	E	R	L	V	V	P	K	L	L	K	T	F	P	Q	L	K	G	V	K	I	D	Y	R
Query Conservation																																													.	.	.
Alig confidence								.	.	.	.	.																																	.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		I	F	A	P	P	P	.	.	.	.	.	G	I	D	C	H	D	W	P	M	L	V	S	L	D	E	S	F	Y	L	K	P	D	A	G	M	L	L	G	S	P	A	N	A	D	P	V	E	A	H	D	V	Q	P	E	Q	L	D	I	A	T	G	M	Y	L	I	E	E	A	T	T	L	T	I	R	R	P	E	H	T
Template Known Secondary structure							T	.	.	.	.	.	T				T	T							T	T	S	S							T	T														S	S																				B	S							S
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		1226	.	.	.	1230	.						.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.							.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																					.	.																																							.	.	.	.	.	.
Query SS confidence																					.	.																																							.	.	.	.	.	.
Query Sequence		W	T	G	N	F	L	L	T	L	S	R	M	P	Q	F	G	R	L	D	.	.	T	N	I	Y	Y	M	Q	G	Y	S	G	H	G	V	T	C	T	H	L	A	G	R	L	I	A	E	L	L	R	G	D	A	E	R	F	D	A	F	.	.	.	.	.	.	A	N	L	P	H	Y	P	F	P	G
Query Conservation																					.	.																																							.	.	.	.	.	.
Alig confidence																					.	.																																							.	.	.	.	.	.
Template Conservation
Template Sequence		W	A	G	L	R	S	F	V	A	D	G	D	L	V	A	G	Y	A	A	N	A	E	G	F	F	W	V	A	A	Q	G	G	Y	G	I	Q	T	S	A	A	M	G	E	A	S	A	A	L	I	R	H	Q	P	L	P	A	H	L	R	E	H	G	L	D	E	A	M	L	S	P	R	R	L	S	P
Template Known Secondary structure										T	T	S								T	T	S	T	T								T	T		T	T	T	T													T	T										T	T								G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		1301	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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