Job Description P37906 Confidence 100.00% Date Thu Jan 5 11:57:45 GMT 2012 Rank 9 Aligned Residues 367 % Identity 17% Template c3bhkA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:monomeric sarcosine oxidase; PDBTitle: crystal structure of r49k mutant of monomeric sarcosine oxidase2 crystallized in phosphate as precipitant Resolution 1.71 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		S	I	T	C	D	V	C	V	V	G	G	G	Y	T	G	L	S	S	A	L	H	L	A	E	A	G	F	D	V	V	V	L	E	A	S	R	I	.	.	G	F	G	A	S	G	R	N	G	G	Q	L	V	N	S	Y	S	R	D	I	D	V	I	E	K	S	Y	G	M	D	T	A	R	M	L	G	S	M	M	F	E
Query Conservation																																							.	.
Alig confidence																																							.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	H	F	D	V	I	V	V	G	A	G	S	M	G	M	A	A	G	Y	Q	L	A	K	Q	G	V	K	T	L	L	V	D	A	F	D	P	P	H	T	N	G	S	H	H	G	D	T	K	I	I	R	H	A	Y	G	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	Y	V	P	L	A	L	R
Template Known Secondary structure													S													T	T								S	S		S	S		S	S	S	S	S		S	S						S	S		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.														.	60	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		G	G	E	I	I	R	E	R	I	K	R	Y	Q	I	D	C	D	Y	R	P	G	G	L	F	V	A	M	N	D	K	Q	L	A	T	L	E	E	Q	K	E	N	W	E	R	Y	G	N	K	Q	L	E	L	L	D	A	N	A	I	R	R	.	.	E	V	A	S	D	R	Y	T	G	A	L	L	D	H	S	G	G	H
Query Conservation																																																														.	.
Alig confidence																													.																																	.	.
Template Conservation																													.
Template Sequence		S	Q	E	L	W	Y	E	L	E	K	E	T	H	H	K	I	F	T	K	T	G	V	L	V	F	G	P	.	K	G	E	S	A	F	V	A	E	T	M	E	A	A	K	E	H	S	L	T	V	D	L	L	E	G	D	E	I	N	K	R	W	P	G	I	T	V	P	E	N	Y	N	A	I	F	E	P	N	S	G	V
Template Known Secondary structure														S	S														.	T	T	S														T	T								T							S	T	T					T	T							T	T
Template Predicted Secondary structure																													.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.																										.
Query SS confidence																																							.																										.
Query Sequence		I	H	P	L	N	L	A	I	G	E	A	D	A	I	R	L	N	G	G	R	V	Y	E	L	S	A	V	T	Q	I	Q	H	T	T	P	A	V	.	V	R	T	A	K	G	Q	V	T	A	K	Y	V	I	V	A	G	N	A	Y	L	G	D	K	V	.	E	P	E	L	A	K	R	S	M	P	C	G	T	Q	V	I
Query Conservation																																							.																										.
Alig confidence																																							.																										.
Template Conservation
Template Sequence		L	F	S	E	N	C	I	R	A	Y	R	E	L	A	E	A	R	G	A	K	V	L	T	H	T	R	V	E	D	F	D	I	S	P	D	S	V	K	I	E	T	A	N	G	S	Y	T	A	D	K	L	I	V	S	M	G	A	W	N	S	K	L	L	S	K	L	N	L	D	I	P	L	Q	P	Y	R	Q	V	V	G
Template Known Secondary structure																		T	T						S										T	T							T	T													G	G	G					G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.											.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	E	R	L	S	E	D	L	A	R	S	L	I	P	K	N	Y	C	V	E	D	C	N	Y	L	L	D	Y	Y	R	L	T	A	D	N	R	L	L	Y	G	G	G	V	.	.	.	.	.	.	.	.	.	.	V	Y	G	A	R	D	P	D	D	V	E	R	L	V	V	P	K	L	L	K	T	F	P	Q	L	K
Query Conservation																																														.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																											.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		F	F	E	S	D	E	S	K	Y	S	N	D	I	D	F	P	G	.	F	M	V	E	V	P	N	G	I	Y	Y	G	F	P	S	F	G	G	C	G	L	K	L	G	Y	H	T	F	G	Q	K	I	D	P	D	T	I	N	R	E	F	G	V	Y	P	E	D	E	S	N	L	R	A	F	L	E	E	Y	M	P	G	A
Template Known Secondary structure											B	G	G	G	T				.						T	T								B	S	T	T								S	S							T	T	T					T	T	S	S																G	G	G
Template Predicted Secondary structure																			.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		G	V	K	I	D	Y	R	W	T	G	N	F	L	L	T	L	S	R	M	P	Q	F	G	R	L	D	.	.	T	N	I	Y	Y	M	Q	G	Y	S	G	H	G	V	T	C	T	H	L	A	G	R	L	I	A	E	L	L	R	G	D	A	E	R	F	D	A	F	A	N	L	P	H	Y	P	F	P	G	G	R	T	L
Query Conservation																												.	.
Alig confidence																												.	.																																					.
Template Conservation																																																																		.
Template Sequence		N	G	E	L	K	R	G	A	V	C	M	Y	T	K	T	L	D	E	H	F	I	I	D	L	H	P	E	H	S	N	V	V	I	A	A	G	F	S	G	H	G	F	K	F	S	S	G	V	G	E	V	L	S	Q	L	A	L	T	G	K	T	E	H	D	.	I	S	I	F	S	I	N	R	P	A	L	K	E	S	L
Template Known Secondary structure																	T	T	S								T	T											T	T			G	G	G															S			S	S		.		G	G	G		T	T		G	G	G	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		407
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		385

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions