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Job DescriptionP37906
Confidence100.00%DateThu Jan 5 11:57:45 GMT 2012
Rank11Aligned Residues352
% Identity17%Templatec2uzzD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:n-methyl-l-tryptophan oxidase; PDBTitle: x-ray structure of n-methyl-l-tryptophan oxidase (mtox)
Resolution3.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.. .......70.........80.........90.........100....
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Query Sequence  TCDVCVVGGGYTGLSSALHLAEAGFDVVVLEASRIG. . FGASGRNGGQLVNSYSRDIDVIEKSYGMDTARMLGSMMFEGG
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Template Sequence  KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEG. . . . . . . . . . . . . EKYVPLVLRAQ
Template Known Secondary structure 
S
TTTT


SS
SSSSSSSS
SS
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   2.......10.........20.........30.........40.........50....... ..60........
 
   105....110.........120.........130.........140.........150.........160..... ....170.........180.
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Query Sequence  EIIRERIKRYQIDCDYRPGGLFVAMNDKQLATLEEQKENWERYGNKQLELLDANAIRREVA. . . SDRYTGALLDHSGGHI
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Template Sequence  MLWDELSRHNEDDPIFVRSGVINLGPADS. . TFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFL
Template Known Secondary structure  TT
SSS
S


TT
..TT


STT



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   6970.........80.........90....... ..100.........110.........120.........130.........140......
 
   182.......190.........200.........210..... ....220.........230.........240.........250.........260
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Query Sequence  HPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTP. AVVRTAKGQVTAKYVIVAGNAYLGDKVEPELAKRSMPCGTQVITT
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Template Sequence  RSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGEYQAKKAIVCAGTWVKDLLP. . . ELPVQPVRKVFAWY
Template Known Secondary structure  TT

S


SS
SS


GGGGGGTST...TS


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   147..150.........160.........170.........180.........190.........200......... 210.........220...
 
   261........270.........280.........290.........300.........310 .........320.........330
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Query Sequence  ERLSEDLARSLIPKNYCVEDCNYLLDYYRLTADNRLLYGGGVVYGARDPD. . . . . . . . . . DVERLVVPKLLKTFPQLKGV
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Template Sequence  QADGRYSVKNKFPAF. TGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERVPFAEVVSDGSEAFPFLRNVLPG. . IG
Template Known Secondary structure 

GGGSTTTT

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TTS


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SGGGS

GGGSTTTTTSSTS
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   224.....230........ .240.........250.........260.........270.........280.........290........ .300
 
   331........340.........350.... .....360.........370.........380.........390.........400
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Query Sequence  KIDYRWTGNFLLTLSRMPQFGRLD. . TNIYYMQGYSGHGVTCTHLAGRLIAELLRGDAERFDAFANLPHYPF
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Template Sequence  CCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITGLSGHGFKFASVLGEIAADFAQDKKSDFDL. TPFRLSRF
Template Known Secondary structure  S


TTSS


TT
TT



S

GGGTT


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.GGG
STT
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   301........310.........320.........330.........340.........350.........360... ......370.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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