Job Description P37906 Confidence 100.00% Date Thu Jan 5 11:57:45 GMT 2012 Rank 10 Aligned Residues 357 % Identity 18% Template c2olnA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nikd protein; PDBTitle: nikd, an unusual amino acid oxidase essential for2 nikkomycin biosynthesis: closed form at 1.15 a resolution Resolution 1.15 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		T	C	D	V	C	V	V	G	G	G	Y	T	G	L	S	S	A	L	H	L	A	E	A	G	F	D	V	V	V	L	E	A	S	R	I	G	F	.	.	G	A	S	G	R	N	G	G	Q	L	V	N	S	Y	S	R	D	I	D	V	I	E	K	S	Y	G	M	D	T	A	R	M	L	G	S	M	M	F	E	G	G
Query Conservation																																							.	.
Alig confidence																																							.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Y	D	V	V	V	V	G	G	G	P	V	G	L	A	T	A	W	Q	V	A	E	R	G	H	R	V	L	V	L	E	R	H	T	F	F	N	E	N	G	G	T	S	G	A	E	R	H	W	R	L	Q	Y	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	L	F	R	L	T	L	E	T	L
Template Known Secondary structure											S													T	T								S	S		T	T		S	S	S	S			S	S						S			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.															.	60	.	.	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																													.																																			.	.	.
Query SS confidence																													.																																			.	.	.
Query Sequence		E	I	I	R	E	R	I	K	R	Y	Q	I	D	C	D	Y	R	P	G	G	L	F	V	A	M	N	D	.	K	Q	L	A	T	L	E	E	Q	K	E	N	W	E	R	Y	G	N	K	Q	L	E	L	L	D	A	N	A	I	R	R	E	V	A	.	.	.	S	D	R	Y	T	G	A	L	L	D	H	S	G	G	H
Query Conservation																													.																																			.	.	.
Alig confidence																													.																																			.	.	.
Template Conservation
Template Sequence		P	L	W	R	A	L	E	S	R	C	E	R	R	L	I	H	E	I	G	S	L	W	F	G	D	T	D	V	V	T	N	E	G	Q	I	S	G	T	A	A	M	M	D	K	L	S	V	R	Y	E	W	L	K	A	T	D	I	E	R	R	F	G	F	R	G	L	P	R	D	Y	E	G	F	L	Q	P	D	G	G	T
Template Known Secondary structure												T															S	S			B	T	T	B												T	T																			S			T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.																										.
Query SS confidence																																							.																										.
Query Sequence		I	H	P	L	N	L	A	I	G	E	A	D	A	I	R	L	N	G	G	R	V	Y	E	L	S	A	V	T	Q	I	Q	H	T	T	P	A	V	.	V	R	T	A	K	G	Q	V	T	A	K	Y	V	I	V	A	G	N	A	Y	L	G	D	K	V	.	E	P	E	L	A	K	R	S	M	P	C	G	T	Q	V	I
Query Conservation																																							.																										.
Alig confidence																																							.																										.
Template Conservation
Template Sequence		I	D	V	R	G	T	L	A	A	L	F	T	L	A	Q	A	A	G	A	T	L	R	A	G	E	T	V	T	E	L	V	P	D	A	D	G	V	S	V	T	T	D	R	G	T	Y	R	A	G	K	V	V	L	A	C	G	P	Y	T	N	D	L	L	E	P	L	G	A	R	L	A	Y	S	V	Y	E	M	A	I	A
Template Known Secondary structure																		T	T						S										T	T							S	S													G	G	G						G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.	.	.	.	.	.	300	.											.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																																	.	.	.													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.													.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	E	R	L	S	E	D	L	A	R	S	L	I	P	K	N	Y	C	V	E	D	C	N	Y	L	L	D	Y	Y	R	.	.	.	L	T	A	D	N	R	L	L	Y	G	G	G	.	.	.	.	.	.	.	.	.	.	V	V	Y	G	A	R	D	P	D	D	V	E	R	L	V	V	P	K	L	L	K	T	F	P
Query Conservation																																	.	.	.													.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Y	R	Q	A	T	P	V	T	E	A	P	F	W	F	A	F	Q	Q	P	T	P	Q	D	T	N	L	F	Y	G	F	G	H	N	P	W	A	P	G	E	F	V	R	C	G	P	D	F	E	V	D	P	L	D	H	P	S	A	A	T	G	V	A	D	R	R	Q	M	D	R	L	S	G	W	L	R	D	H	L	P
Template Known Secondary structure					B		S			S													S	S	S											S	S	S	S	S	S											S			S	S	G	G	G			S	S																		T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		326	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																							.	.	.	.
Query SS confidence									.																							.	.	.	.
Query Sequence		Q	L	K	G	V	K	I	.	D	Y	R	W	T	G	N	F	L	L	T	L	S	R	M	P	Q	F	G	R	L	D	.	.	.	.	T	N	I	Y	Y	M	Q	G	Y	S	G	H	G	V	T	C	T	H	L	A	G	R	L	I	A	E	L	L	R	G	D	A	E	R	F	D	A	F	A	N	L	P	H	Y
Query Conservation									.																							.	.	.	.
Alig confidence									.																							.	.	.	.																																						.
Template Conservation																																																																									.
Template Sequence		T	V	D	P	D	P	V	R	T	S	T	C	L	A	V	L	P	T	D	P	E	R	Q	F	F	L	G	T	A	R	D	L	M	T	H	G	E	K	L	V	V	Y	G	A	G	W	A	F	K	F	V	P	L	F	G	R	I	C	A	D	L	A	V	E	D	S	T	A	Y	D	I	.	S	R	L	A	P	Q
Template Known Secondary structure		T	B		S	S		S											S	S	T	T								S	T	T	T	S	T	T	G	G	G							S	S		G	G	G															S			S	S			.	G	G	G	S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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