Job Description P37906 Confidence 99.98% Date Thu Jan 5 11:57:45 GMT 2012 Rank 19 Aligned Residues 320 % Identity 13% Template c1c0iA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-amino acid oxidase; PDBTitle: crystal structure of d-amino acid oxidase in complex with2 two anthranylate molecules Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	I	T	C	D	V	C	V	V	G	G	G	Y	T	G	L	S	S	A	L	H	L	A	E	A	G	F	D	V	V	V	L	E	A	S	R	I	G	F	G	A	S	G	R	N	G	G	Q	L	V	N	S	Y	S	R	D	I	D	V	I	E	K	S	Y	G	M	D	T	A	R	M	L	G	S	M	M	F	E	G
Query Conservation
Alig confidence																																																															.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.
Template Sequence		M	H	S	Q	K	R	V	V	V	L	G	S	G	V	I	G	L	S	S	A	L	I	L	A	R	K	G	Y	S	V	H	I	L	A	R	D	L	P	E	D	V	S	S	Q	T	F	A	S	P	W	A	G	A	N	W	T	P	F	M	T	L	.	.	.	.	.	.	.	.	.	T	D	G	P	R	Q	A	K	W	E
Template Known Secondary structure					S									S													T	T								S	S		T	T		T	T		T	T	S	S	G	G	G				B					S		T	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		1001	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.										.	.	.	.	.	.	.	.	1070	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	I	I	R	E	R	I	K	R	Y	Q	I	D	C	D	Y	R	P	G	G	L	F	V	A	M	N	D	K	Q	L	A	T	L	E	E	Q	K	E	N	W	E	R	Y	G	N	K	Q	L	E	L	L	D	A	N	A	I	R	R	E	V	A	S	D	R	Y	T	G	A	L	L	D	H	S	G	G	H	I	H	P
Query Conservation
Alig confidence																																						.	.	.	.	.																			.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		E	S	T	F	K	K	W	V	E	L	V	P	T	G	H	A	M	W	L	K	G	T	R	R	F	A	Q	N	E	D	G	L	L	G	H	W	.	.	.	.	.	Y	K	D	I	T	P	N	Y	R	P	L	P	S	S	E	C	P	P	.	.	.	.	.	.	.	G	A	I	G	V	T	Y	D	T	L	S	V	H	A
Template Known Secondary structure												T	T	T	T	S	S											S	S	G	G	G	G	G	G	G	T	.	.	.	.	.	T	T	T	T	S	T	T						G	G	G	S		T	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																						.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		1072	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.						.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.								.	.	.	.	1130	.	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	L	A	I	G	E	A	D	A	I	R	L	N	G	G	R	V	Y	E	L	S	A	V	T	Q	I	Q	H	T	T	P	A	V	V	R	T	A	K	G	Q	V	T	A	K	Y	V	I	V	A	G	N	A	Y	L	G	D	K	V	E	P	E	L	A	K	R	S	M	P	C	G	T	Q	V	I	T	T	E	R	L
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.																											.																.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.																											.																.	.
Template Sequence		P	K	Y	C	Q	Y	L	A	R	E	L	Q	K	L	G	A	T	F	E	R	R	T	V	T	S	.	.	.	.	.	.	.	.	.	.	.	L	E	Q	A	F	D	G	A	D	L	V	V	N	A	T	G	L	G	A	K	S	I	A	G	I	D	.	D	Q	A	A	E	P	I	R	G	Q	T	V	L	V	K	.	.
Template Known Secondary structure															T	T									S	B	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T		S	S		S							G	G	G	G	G	T	S	B	T	T		.		T	T													.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																											.																.	.
Template SS confidence
		1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.												.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190		.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.				.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																												.	.	.																											.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.																											.	.	.	.	.	.	.	.	.
Query Sequence		S	E	D	L	A	R	S	L	I	P	K	N	Y	C	V	E	D	C	N	Y	L	L	D	Y	Y	R	L	T	A	D	N	R	L	L	Y	G	G	G	V	V	Y	G	.	.	.	A	R	D	P	D	D	V	E	R	L	V	V	P	K	L	L	K	T	F	P	Q	L	K	G	V	K	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.	.																											.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																					.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	S	P	C	K	R	C	T	M	D	S	S	D	P	A	S	P	A	Y	I	I	P	R	P	G	G	E	V	I	C	G	G	T	Y	G	V	G	D	W	D	L	S	V	N	P	E	T	V	Q	R	I	L	K	H	C	L	R	L	D	P	T	I	S	S	D	G	T	I	E	G	I	E	V	L	R
Template Known Secondary structure		.	.	.	.	.	.											S		T	T									T	T	T											T					S																		G	G	G	S	S	S	S	S	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								1206	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.
																						332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	Y	R	W	T	G	N	F	L	L	T	L	S	R	M	P	Q	F	G	R	L	D	.	.	T	N	I	Y	Y	M	Q	G	Y	S	G	H	G	V	T	C	T	H	L	A	G	R	L	I	A	E	L	L	R	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation
Template Sequence		H	N	V	G	L	R	P	A	R	R	G	G	P	R	V	E	A	E	R	I	V	L	P	L	D	R	T	K	S	P	L	S	L	G	R	G	S	A	R	A	A	K	E	K	E	V	T	L	V	H	A	Y	G	F	S	S	A	G	Y	Q	Q	S	W	G	A	A	E	D	V	A	Q	L	V	D	E
Template Known Secondary structure											T	T	S											S			T	T	T		T	T		S	S		S					S														G	G	G
Template Predicted Secondary structure
Template SS confidence
		1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions