 |
Job Description | P0AEC3 | Confidence | 54.92% | Date | Thu Jan 5 11:22:59 GMT 2012 |
Rank | 316 | Aligned Residues | 31 |
% Identity | 13% | Template | d1xtda2 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 2.70 |
|
  |   |
576 | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | I | Q | L | P | D | M | T | G | L | D | I | S | R | E | L | T | K | R | Y | P | R | E | D | L | P | P | L | V | A | L | T | A |
Query Conservation |   |
|   |   |
|
|   |
|
|
|   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   | . | . |   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|   |
|   |
|   |
|
|
Template Sequence |   |
D | L | D | X | P | P | . |
. |
D | A | A | L | A | T | Q | I | K | E | Q | F | D | S | G | K | E | V | L | V | V | V | V | S | A |
Template Known Secondary structure |   |
|
| B |
|
| S | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
129 | 130 | . | . | . | . | |
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|