 |
Job Description | P0AEC3 | Confidence | 97.60% | Date | Thu Jan 5 11:22:59 GMT 2012 |
Rank | 233 | Aligned Residues | 98 |
% Identity | 20% | Template | d1pvga2 |
SCOP info | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
| ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
| DNA gyrase/MutL, N-terminal domain
|
Resolution | 1.80 |
|
 |
  |   |
399 | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | |
|
|
|
. | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | |
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
| . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
L | R | Q | I | L | W | N | L | I | S | N | A | V | K | F | T | . |
. |
. |
. |
Q | Q | G | Q | V | T | V | R | V | R | Y | D | E | G | D | M | L | H | F | E | V | E | D | S | G | I | G | I | P | Q | D | E | L | D | K | . |
. |
. |
. |
. |
. |
. |
. |
I | F | A | M | Y | Y | Q | V | K | D | S | H | G | G | K | . |
. |
Query Conservation |   |
|   |
|
|
|   |
|
|
|   |
|
|
|
|   |
| . | . | . | . |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
|   |   |
|
|   |
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   | . | . | . |   |
|
|
|   |
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
L | F | K | I | F | D | E | I | L | V | N | A | A | D | N | K | V | R | D | P | S | X | K | R | I | D | V | N | I | H | A | E | E | H | . |
. |
. |
T | I | E | V | K | N | D | G | K | G | I | P | I | E | I | H | N | K | E | N | I | Y | I | P | E | X | I | F | G | H | L | L | T | S | S | N | Y | D | D | D | E | K | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  | T | T | T | T | . | . | . |  |  |  |  |  |  |  | S | S |
|
|
|
| S | B |
| T | T | T |
| S | B |  |  |  |  |  |  |  | S | S | S |
|
| S |
|
|
| T | T | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | |
|
|
. | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |
  |   |
|
465 | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | |
. | . | . | . | . | . | . | 500 | . | . | . |
Predicted Secondary structure |   |
. |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
P | A | T | G | T | G | I | G | L | A | V | S | R | R | L | A | K | N | M | G | G | D | I | T | V | T | S | E | . |
Q | G | K | G | S | T | F | T | L | T | I |
Query Conservation |   |
. |   |   |   |
|
|
|
|
|
|   |
|   |   |   |
|
|   |   |   |
|
|   |
|   |
|   |
|   | . |   |
|   |
|
|   |
|   |
|   |
|
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|   |
|   |   |   |
|
|
|   |
|   | . | . | . | . |   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
V | T | G | G | R | N | G | Y | G | A | K | L | C | N | I | F | S | T | . |
. |
. |
. |
E | F | I | L | E | T | A | D | L | N | V | G | Q | K | Y | V | Q | K | W |
Template Known Secondary structure |   |
|
| S |
|
| S | S |
|  |  |  |  |  |  |  | T |  |  | . | . | . | . |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
137 | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | |
|
|
|
. | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|