Job Description P0AEC3 Confidence 99.40% Date Thu Jan 5 11:22:59 GMT 2012
Rank 163 Aligned Residues 110
% Identity 13% Template c3mfxA_
PDB info
PDB header: transcriptionChain: A: PDB Molecule: sensory box/ggdef family protein;
PDBTitle: crystal structure of the sensory box domain of the sensory-2 box/ggdef protein so_1695 from shewanella oneidensis,3 northeast structural genomics consortium target sor288b
Resolution 2.40 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
151 . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 . . . . . . . . . 230
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
E Q Q S S F L R S F L D A S P D L V F Y R N E D K E F S G C N R A M E L L T G K S E K Q L V H L K P A D V Y S P E A A A K V I E T D E K V F R H N V S L T Y E Q
Query Conservation  
                                                                                                                             
Alig confidence  
. . .
Template Conservation  
                                                                                                                  . . .      
Template Sequence  
H S S L E T I E L F I Q H L T E A X I L V N A N G F I R S C N Q R S A E L L D C P Q V S L K G Q D W R N F L T E H H Q A R Y D N L L S Q P V Q H P .
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A Q E T
Template Known Secondary structure  
T T S S T T S B T T S T T S B G G G G B T T G G G G T T S . . .
Template Predicted Secondary structure  
. . .
Template SS confidence  
   
19 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 .
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231 . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
W L D Y P D G R K A C F E I R K V P Y Y D R V G K R H G L M G F G R D I
Query Conservation  
                                                           
Alig confidence  
. . .
Template Conservation  
                          . . .                      
Template Sequence  
T L I C A S G K A K D V E L S I S Y I .
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P G H E P X F V X V X H D L
Template Known Secondary structure  
T T S . . . S S S
Template Predicted Secondary structure  
. . .
Template SS confidence  
   
106 . . . 110 . . . . . . . . . 120 . . . .
. . . . . 130 . . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]