Job Description P0AEC3 Confidence 99.31% Date Thu Jan 5 11:22:59 GMT 2012 Rank 177 Aligned Residues 124 % Identity 16% Template c3kx0X_ PDB info PDB header:signaling protein Chain: X: PDB Molecule:uncharacterized protein rv1364c/mt1410; PDBTitle: crystal structure of the pas domain of rv1364c Resolution 2.30 Å

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		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		T	Q	I	Q	L	E	Q	Q	S	S	F	L	R	S	F	L	D	A	S	P	D	L	V	F	Y	R	N	.	E	D	K	E	F	S	G	C	N	R	A	M	E	L	L	T	G	K	S	E	K	Q	L	V	H	L	K	P	A	D	V	Y	S	P	E	A	A	A	K	V	I	E	T	D	E	K	V	F	R	H	N	V
Query Conservation																													.
Alig confidence																													.																			.	.
Template Conservation																																																.	.
Template Sequence		D	W	D	K	T	V	G	A	A	E	D	V	R	R	I	F	E	H	I	P	A	I	L	V	G	L	E	G	P	D	H	R	F	V	A	V	N	A	A	Y	R	G	F	S	P	L	.	.	L	D	T	V	G	Q	P	A	R	E	V	Y	P	E	L	E	G	Q	Q	I	Y	E	X	L	D	R	V	Y	Q	T	G	E
Template Known Secondary structure							T														S	S							T	T	T	T																.	.		S		T	T	S	B						T	T	S		S	S	S	S
Template Predicted Secondary structure																																																.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	T	Y	E	Q	W	L	D	Y	P	D	G	R	K	A	C	F	E	I	R	K	V	P	Y	Y	D	R	V	G	K	R	H	G	L	M	G	F	G	R	D	I	T	E	R	K	R	Y	Q	D
Query Conservation
Alig confidence											.	.	.
Template Conservation											.	.	.
Template Sequence		P	Q	S	G	S	E	W	R	L	.	.	.	Q	E	E	R	Y	F	D	F	V	V	T	P	R	R	R	A	D	G	S	I	E	G	V	Q	L	I	V	D	D	V	T	S	R	V	R	A	R	Q
Template Known Secondary structure											.	.	.																T	T	S																	T	T
Template Predicted Secondary structure											.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions