Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEC3
Confidence97.98%DateThu Jan 5 11:22:59 GMT 2012
Rank226Aligned Residues97
% Identity15%Templatec3h4lB_
PDB info PDB header:dna binding protein, protein bindingChain: B: PDB Molecule:dna mismatch repair protein pms1; PDBTitle: crystal structure of n terminal domain of a dna repair protein
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   399400.........410.........420.........430.........440.........450.........460.... .....470...
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Query Sequence  LRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHGGK. . . . . PATGTGIGL
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Template Sequence  LTTAVKELVDNSIDA. . . NANQIEIIFKDYGLESIECSDNGDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEAL
Template Known Secondary structure  T...T
SGGGTS
S



TTTGGGSS



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   55....60......... 70.........80.........90.........100.........110.........120.........130.
 
   474.....480.........490.........500...
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Query Sequence  AVSRRLAKNMGGDITVTSEQGKGSTFTLTI
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Template Sequence  SSLCGI. . . . . AKLSVITTTSPPKADKLEY
Template Known Secondary structure  S.....SSSTT
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   132..... ..140.........150......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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