Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEC3
Confidence99.81%DateThu Jan 5 11:22:59 GMT 2012
Rank82Aligned Residues120
% Identity25%Templatec3grcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:sensor protein, kinase; PDBTitle: crystal structure of a sensor protein from polaromonas sp.2 js666
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   524.....530.........540.........550.........560.........570.........580.........590.........600...
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  PALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPL
Query Conservation      





   
       
   
  
  
  
 


        



 
  

 


 
    

         

Alig confidence 












































































.

Template Conservation 

 






       
   
   
  
        
   
     



 
       
      

        .  
Template Sequence  PRPRILICEDDPDIARLLNLXLEKGGFDSDXVHSAAQALEQVARRPYAAXTVDLNLPDQDGVSLIRALRRDSRTRDL. AI
Template Known Secondary structure 

S
SSTT
SSTTS

S
SS
SSS
STTSTT
.
Template Predicted Secondary structure 




























.
Template SS confidence 















































































   546...550.........560.........570.........580.........590.........600.........610.........620.. ..
 
   604.....610..... ....620.........630.........640....
Predicted Secondary structure 


..









Query SS confidence 











. .




























Query Sequence  VALTANVLKDKQ. . EYLNAGMDDVLSKPLSVPALTAMIKKFWD
Query Conservation 
  

       ..     
 
  
 


    
   
     
Alig confidence 











..




























Template Conservation 
 
                
    
 

     
   
   
 
Template Sequence  VVVSANAREGELEFNSQPLAVSTWLEKPIDENLLILSLHRAID
Template Known Secondary structure 
TTTTT
TTSSS
SS

Template Predicted Secondary structure 











Template SS confidence 










































   625....630.........640.........650.........660.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions