Job Description P0AEC3 Confidence 99.06% Date Thu Jan 5 11:22:59 GMT 2012 Rank 206 Aligned Residues 137 % Identity 18% Template c3gecA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:period circadian protein; PDBTitle: crystal structure of a tandem pas domain fragment of2 drosophila period Resolution 4.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		D	A	S	P	D	L	V	F	Y	R	N	E	D	K	E	F	S	G	C	N	R	A	M	E	L	L	T	G	K	S	E	K	Q	L	V	H	L	K	P	A	D	V	Y	S	P	E	A	A	A	K	V	I	E	T	D	E	K	V	F	R	H	N	V	S	.	.	.	.	.	L	T	Y	E	Q	W	L	D	Y	P	D
Query Conservation																																																																		.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.
Template Conservation
Template Sequence		Q	K	S	P	K	F	A	I	R	H	T	A	T	G	I	I	S	H	V	D	S	A	A	V	S	A	L	G	Y	L	P	Q	D	L	I	G	R	S	I	M	D	F	Y	H	H	E	D	L	S	V	M	K	E	T	Y	E	T	V	M	K	K	G	Q	T	A	G	A	S	F	C	S	K	P	Y	R	F	L	I	Q	N
Template Known Secondary structure		S	S	S		B							T	T	S	B						S	T	T	T	T	T	S				G	G	G	S	S	S	S	B					S																		G	G	G	S	S	S				B									S	S
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.											.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	K	A	C	F	E	I	R	K	V	P	Y	Y	D	R	.	V	G	K	R	H	G	L	M	G	F	G	R	D	I	T	E	R	K	R	.	.	.	.	.	.	.	.	.	.	Y	Q	D	A	L	E	R	A	S	R	D	K	T	T	F	I	S	T	I	S	H	E	L	R	T	P	L
Query Conservation																		.																				.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	C	Y	V	L	L	E	T	E	W	T	S	F	V	N	P	W	S	R	K	L	E	F	V	V	G	H	H	R	V	F	Q	G	P	K	Q	C	N	V	F	E	A	A	P	T	C	K	L	K	I	S	E	E	A	Q	S	R	N	T	R	I	K	E	D	I	V	K	R	L	A	E	T	V
Template Known Secondary structure		S															T	T	T	T										B						S	S			S	S	S										T	T	T	T	T	T	T									S	S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions