Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEC3
Confidence99.79%DateThu Jan 5 11:22:59 GMT 2012
Rank95Aligned Residues121
% Identity21%Templatec3eulB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:possible nitrate/nitrite response transcriptional PDBTitle: structure of the signal receiver domain of the putative2 response regulator narl from mycobacterium tuberculosis
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   523......530.........540.........550 .........560.........570.........580.........590.........600
Predicted Secondary structure 












..























Query SS confidence 



























. .

















































Query Sequence  LPALNVLLVEDIELNVIVARSVLEKLGN. . SVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDL
Query Conservation       





   
       
   
 .. 
  
  
 


        



 
  

 


 
    

        
Alig confidence 



























..














































...
Template Conservation 
  







       
   
        
       

   
     



 
  
    
      
      ...
Template Sequence  PEKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELP. . .
Template Known Secondary structure 



S
TSSSS

STT
SSS
TT
S...
Template Predicted Secondary structure 





























...
Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80..
 
   601........610. ........620.........630.........640......
Predicted Secondary structure 



.











Query SS confidence 










.


































Query Sequence  PPLVALTANVL. KDKQEYLNAGMDDVLSKPLSVPALTAMIKKFWDTQ
Query Conservation   


  

   .         
 
  
 


    
   
       
Alig confidence 










.


































Template Conservation    

 

              
    
 

     
   
     

Template Sequence  TRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKGR
Template Known Secondary structure 
S


TT
STT

TT
Template Predicted Secondary structure 















Template SS confidence 














































   83......90.........100.........110.........120.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions