Job Description P0AEC3 Confidence 49.38% Date Thu Jan 5 11:22:59 GMT 2012 Rank 339 Aligned Residues 87 % Identity 14% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.								.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.				.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.																					.	.	.																															.	.
Query SS confidence																				.	.	.	.	.	.	.																					.	.	.																															.	.
Query Sequence		A	R	S	V	L	E	K	L	G	N	S	V	D	V	A	M	T	G	.	.	.	.	.	.	.	K	A	A	L	E	M	F	K	P	G	E	Y	D	L	V	L	L	D	I	Q	.	.	.	L	P	D	M	T	G	L	D	I	S	R	E	L	T	K	R	Y	P	R	E	D	L	P	P	L	V	A	L	T	A	.	.
Query Conservation																				.	.	.	.	.	.	.																					.	.	.																															.	.
Alig confidence																				.	.	.	.	.	.	.																					.	.	.																															.	.
Template Conservation
Template Sequence		L	E	E	H	A	K	R	I	G	V	K	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y	D	A	I	Q	H	A	K	A	R	G	I	D	V	V	L	I	D	T	A	G	R	S	E	T	N	R	N	L	M	D	E	M	K	K	I	A	R	V	T	K	P	N	L	V	I	F	V	G	D	A	L	A	G	N
Template Known Secondary structure									T	T							S	T	T																		T		S								S	S			S	S	S																S								T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		609	610	.	.	.	.	.	.	.	.	.		620	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		N	V	L	K	D	K	Q	E	Y	L	N	.	A	G	M	D	D	V	L	S
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		A	I	V	E	Q	A	R	Q	F	N	E	A	V	K	I	D	G	I	I	L
Template Known Secondary structure		T												S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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