Job Description P0AEC3 Confidence 98.68% Date Thu Jan 5 11:22:59 GMT 2012 Rank 217 Aligned Residues 141 % Identity 11% Template c3cloC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator containing a2 luxr dna binding domain (np_811094.1) from bacteroides3 thetaiotaomicron vpi-5482 at 2.04 a resolution Resolution 2.04 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.									200
Predicted Secondary structure																																													.																												.	.	.	.	.	.	.	.
Query SS confidence																																													.																												.	.	.	.	.	.	.	.
Query Sequence		Q	E	T	F	G	Q	L	K	I	E	I	K	E	R	E	E	T	Q	I	Q	L	E	Q	Q	S	S	F	L	R	S	F	L	D	A	S	P	D	L	V	F	Y	R	N	.	E	D	K	E	F	S	G	C	N	R	A	M	E	L	L	T	G	K	S	E	K	Q	L	V	H	L	K	.	.	.	.	.	.	.	.	P
Query Conservation																																													.																												.	.	.	.	.	.	.	.
Alig confidence																																													.																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	I	D	E	V	Y	A	T	H	P	T	A	H	E	A	L	D	G	I	V	E	Q	H	Q	Q	F	V	R	S	L	T	E	V	N	G	G	C	A	V	I	S	D	L	S	N	R	K	S	Y	V	T	V	H	P	W	A	N	F	L	G	L	T	P	E	E	A	A	L	S	V	I	D	S	X	D	E	D	C	I
Template Known Secondary structure										T	S	G	G	G	G	S																					S								T	T	T	T								T	T		G	G	G												T	T				T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220											.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																													.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.																													.
Query Sequence		A	D	V	Y	S	P	E	A	A	A	K	V	I	E	T	D	E	K	V	F	.	.	.	.	.	.	.	.	.	.	R	H	N	V	S	L	T	Y	E	Q	W	L	D	Y	P	D	G	R	K	A	C	F	E	I	R	K	V	P	.	Y	Y	D	R	V	G	K	R	H	G	L	M	G	F	G	R	D	I	T	E	R
Query Conservation																						.	.	.	.	.	.	.	.	.	.																													.
Alig confidence																						.	.	.	.	.	.	.	.	.	.																													.
Template Conservation
Template Sequence		Y	R	R	I	H	P	E	D	L	V	E	K	R	L	X	E	Y	K	F	F	Q	K	T	F	S	X	S	P	G	E	R	L	K	Y	R	G	R	C	R	L	R	X	X	N	E	K	G	V	Y	Q	Y	I	D	N	L	V	Q	I	X	Q	N	T	P	A	G	N	V	W	L	I	F	C	L	Y	S	L	S	A	D	Q
Template Known Secondary structure			T	T	B																					T	S						T	T												T	T	S																T	T	S													S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		270
Predicted Secondary structure
Query SS confidence
Query Sequence		K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		167

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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