Job Description P0AEC3 Confidence 99.54% Date Thu Jan 5 11:22:59 GMT 2012 Rank 145 Aligned Residues 192 % Identity 21% Template c3c3wB_ PDB info PDB header:transcription Chain: B: PDB Molecule:two component transcriptional regulatory protein devr; PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic response2 regulator dosr Resolution 2.20 Å

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		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.			.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		L	N	V	L	L	V	E	D	I	E	L	N	V	I	V	A	R	S	V	L	E	K	L	G	N	S	.	.	V	D	V	A	M	T	G	K	A	A	L	E	M	F	K	P	G	E	Y	D	L	V	L	L	D	I	Q	L	P	D	M	T	G	L	D	I	S	R	E	L	T	K	R	Y	P	R	E	D	L	P	P	L
Query Conservation																												.	.
Alig confidence																												.	.																																															.	.	.
Template Conservation																																																																												.	.	.
Template Sequence		V	K	V	F	L	V	D	D	H	E	V	V	R	R	G	L	V	D	L	L	G	A	D	P	E	L	D	V	V	G	E	A	G	S	V	A	E	A	M	A	R	V	P	A	A	R	P	D	V	A	V	L	D	V	R	L	P	D	G	N	G	I	E	L	C	R	D	L	L	S	R	M	P	D	.	.	.	L	R	C
Template Known Secondary structure									S														T		T	T								S	S														S						S			T	T														S	T	T	.	.	.
Template Predicted Secondary structure																																																																												.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.	.
		604	.	.	.	.	.	610	.	.		.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650													.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670
Predicted Secondary structure											.																																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.																																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	L	T	A	N	V	L	K	.	D	K	Q	E	Y	L	N	A	G	M	D	D	V	L	S	K	P	L	S	V	P	A	L	T	A	M	I	K	K	F	W	D	T	Q	D	D	E	E	.	.	.	.	.	.	.	.	.	.	.	.	S	T	V	T	T	E	E	N	S	K	S	E	A	L	L	D	I	P	M	L
Query Conservation											.																																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	L	T	S	Y	T	S	D	E	A	M	L	D	A	I	L	A	G	A	S	G	Y	V	V	K	D	I	K	G	M	E	L	A	R	A	V	K	D	V	G	A	G	R	S	L	L	D	N	R	A	A	A	A	L	M	A	K	L	R	G	A	A	E	K	Q	D	P	L	S	G	L	T	D	Q	E	R	T	L	L
Template Known Secondary structure				G	G	G	S	S	S											T																									G	G	G	S																			S		T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		671	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	Y	L	E	L	V	G	P	K	L	I	T	D	G	L	A	V	F	E	K	M	M	P	G	Y	V	S	V	L	E	S	N	L	T	A	Q	D	K	K	G	I	V	E	E	G	H	K	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	L	S	E	G	L	T	N	K	Q	I	A	D	R	M	F	L	A	E	K	T	V	K	N	Y	V	S	R	L	L	A	K	L	G	M	E	R	R	T	Q	A	A	V	F	A	T	E	L	K
Template Known Secondary structure					T	T	T											T																	T	T			S	S											T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions