Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEC3
Confidence99.81%DateThu Jan 5 11:22:59 GMT 2012
Rank76Aligned Residues115
% Identity20%Templatec3b2nA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:uncharacterized protein q99uf4; PDBTitle: crystal structure of dna-binding response regulator, luxr family, from2 staphylococcus aureus
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   527..530.........540.........550 .........560.........570.........580.........590.........600....
Predicted Secondary structure 









..
























Query SS confidence 























. .





















































Query Sequence  NVLLVEDIELNVIVARSVLEKLGN. . SVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLV
Query Conservation   





   
       
   
 .. 
  
  
 


        



 
  

 


 
    

         


Alig confidence 























..














































...



Template Conservation   





       
   
        
        

        



 
  

   
      
      ...  

Template Sequence  SLIIAEDQNMLRQAMVQLIKLHGDFEILADTDNGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLN. . . IKVI
Template Known Secondary structure 
S
SSS


S
SS
SSS
TT
S...
Template Predicted Secondary structure 
























...



Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70....... ..80.
 
   605....610. ........620.........630.........640....
Predicted Secondary structure 


.









Query SS confidence 






.
































Query Sequence  ALTANVL. KDKQEYLNAGMDDVLSKPLSVPALTAMIKKFWD
Query Conservation    

   .         
 
  
 


    
   
     
Alig confidence 






.
































Template Conservation    
          
   
   

 

     
   
  
  
Template Sequence  IVTTFKRPGYFEKAVVNDVDAYVLKERSIEELVETINKVNN
Template Known Secondary structure  S


TT
STTS

Template Predicted Secondary structure 











Template SS confidence 








































   82.......90.........100.........110.........120..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions