Job Description P0AEC3 Confidence 100.00% Date Thu Jan 5 11:22:59 GMT 2012 Rank 2 Aligned Residues 329 % Identity 20% Template c3a0rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of histidine kinase thka (tm1359) in complex with2 response regulator protein trra (tm1360) Resolution 3.80 Å

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		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	R	S	F	L	D	A	S	P	D	L	V	F	Y	R	N	E	D	K	E	F	S	G	C	N	R	A	M	E	L	L	T	G	K	S	E	K	Q	L	V	H	L	K	P	A	D	V	Y	S	P	E	A	A	A	K	V	I	E	T	D	E	K	V	F	R	H	N	V	S	L	T	Y	E	Q	W	L	D	Y	P
Query Conservation
Alig confidence																																																																	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.
Template Sequence		F	S	E	S	I	L	E	S	L	E	T	A	I	I	T	L	S	K	D	G	R	I	T	E	W	N	K	K	A	E	Q	L	F	G	L	K	K	E	N	V	L	G	R	R	L	K	D	L	P	D	F	E	E	I	G	S	V	A	E	S	V	F	E	.	.	.	.	.	.	.	N	K	E	P	V	F	L	N	F	Y
Template Known Secondary structure					S	S	G	G	G	S	S	S							S	S	S	B		S		B									S			S	T	T	T	T	T		B	S	T	T	S	T	T	T	T												.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.								.	.	480	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.				.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.
Predicted Secondary structure																																											.	.	.																															.
Query SS confidence																																											.	.	.																															.
Query Sequence		D	G	R	K	A	C	F	E	I	R	K	V	P	Y	Y	D	R	V	G	K	R	H	G	L	M	G	F	G	R	D	I	T	E	R	K	R	Y	Q	D	A	L	.	.	.	E	R	A	S	R	D	K	T	T	F	I	S	T	I	S	H	E	L	R	T	P	L	N	G	I	V	G	L	S	R	.	I	L	L	D	T
Query Conservation																																											.	.	.																															.
Alig confidence																																											.	.	.																															.
Template Conservation
Template Sequence		K	F	G	E	R	Y	F	N	I	R	F	S	P	F	R	N	A	K	T	Q	L	L	E	G	V	I	I	T	I	D	D	V	T	E	L	Y	K	Y	E	E	E	R	K	R	R	E	R	L	S	I	L	G	E	M	T	A	R	V	A	H	E	I	R	N	P	I	T	I	I	G	G	F	I	M	R	M	K	K	H	L
Template Known Secondary structure			B	T	T	B												T	T	T	T	S	S											S	T	T	T	T	T	T	T	T	T	T																																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	T	A	E	Q	E	K	Y	L	K	T	I	H	V	S	A	V	T	L	G	N	I	F	N	D	I	I	D	M	D	K	M	E	R	R	K	V	Q	L	D	N	Q	P	V	D	F	T	S	F	L	A	D	L	E	N	L	S	A	L	Q	A	Q	Q	K	G	L	R	F	N	L	E	P	T	L	P	L	P	H	Q
Query Conservation
Alig confidence																																		.	.	.	.																																												.
Template Conservation																																		.	.	.	.																																												.
Template Sequence		D	D	P	E	T	L	K	K	Y	I	N	I	I	T	N	E	L	S	R	L	E	T	I	V	K	E	I	L	E	Y	S	K	.	.	.	.	E	R	V	L	E	F	T	E	F	N	L	N	E	L	I	R	E	V	Y	V	L	F	E	E	K	I	R	K	M	N	I	D	F	C	F	E	T	D	N	E	D	L	R	.
Template Known Secondary structure		S		S	S		T	T																										.	.	.	.																											T	T	T	T								S		S				.
Template Predicted Secondary structure																																		.	.	.	.																																												.
Template SS confidence
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.					600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	T	D	G	T	R	L	R	Q	I	L	W	N	L	I	S	N	A	V	K	F	T	Q	Q	G	Q	V	T	V	R	V	R	Y	D	E	G	D	M	L	H	F	E	V	E	D	S	G	I	G	I	P	Q	D	E	L	D	K	I	F	A	M	Y	Y	Q	V	K	D	S	H	G	G	K	P	A	T	G	T	G	I
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	A	D	R	T	R	I	K	Q	V	L	I	N	L	V	Q	N	A	I	E	A	T	G	E	N	G	K	I	K	I	T	S	E	D	M	Y	T	K	V	R	V	S	V	W	N	S	G	P	P	I	P	E	E	L	K	E	K	I	F	S	P	F	F	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	L
Template Known Secondary structure																		T					T	T		T	T											T	T										S					G	G	G	G	T	T	T	S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.														.	.	710
		472	.	.	.	.	.	.	.	480	.		.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		G	L	A	V	S	R	R	L	A	K	.	N	M	G	G	D	I	T	V	T	S	E	Q	G	K	G	S	T	F	T	L	T	I	H	A	P	S	V	A	E
Query Conservation												.
Alig confidence												.												.
Template Conservation																								.
Template Sequence		G	L	S	I	C	R	K	I	I	E	D	E	H	G	G	K	I	W	T	E	N	R	.	E	N	G	V	V	F	I	F	E	I	P	K	T	P	E	K	R
Template Known Secondary structure				T									T	T		S	B							.	S	S										S		T	T
Template Predicted Secondary structure																								.
Template SS confidence
		717	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.		.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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