Job Description P0AEC3 Confidence 99.43% Date Thu Jan 5 11:22:59 GMT 2012 Rank 159 Aligned Residues 112 % Identity 21% Template c2q2eB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei Resolution 4.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.					.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		L	R	Q	I	L	W	N	L	I	S	N	A	V	K	F	T	Q	Q	G	.	.	.	.	Q	V	T	V	R	V	R	Y	D	E	G	D	M	L	H	F	E	V	E	D	S	G	I	G	I	P	Q	D	E	L	D	K	I	F	A	M	Y	Y	Q	V	K	D	S	H	G	G	K	P	A	T	G	T	G	I	G	L	A
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.																																									.	.
Template Conservation																																																																	.	.
Template Sequence		L	I	T	T	V	K	E	A	V	D	N	A	L	D	A	C	E	E	A	G	I	L	P	D	I	L	V	Q	V	E	R	T	G	P	D	Y	V	T	V	I	I	E	D	N	G	P	G	I	V	R	E	Q	I	P	K	V	F	A	K	L	L	Y	G	.	.	F	H	A	L	K	S	R	G	Q	Q	G	I	G	I	S
Template Known Secondary structure																		T	T	T	S		S											T	T	T										S					G	G	G						S						.	.								S	S	S	S
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.		.	.	.	490	.	.		.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure														.							.
Query SS confidence														.							.
Query Sequence		V	S	R	R	L	A	K	N	M	G	G	D	.	I	T	V	T	S	E	.	Q	G	K	G	S	T	F	T	L	T	I	H	A	P	S	V	A	E	E	V
Query Conservation														.							.
Alig confidence														.							.
Template Conservation
Template Sequence		A	A	V	L	Y	A	Q	M	T	A	G	R	H	T	K	I	L	S	K	T	S	P	T	A	P	A	H	Y	Y	E	L	M	I	N	T	S	T	N	E	P
Template Known Secondary structure											T											S	S	S	S											S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions