Job Description P0AEC3 Confidence 59.29% Date Thu Jan 5 11:22:59 GMT 2012 Rank 309 Aligned Residues 111 % Identity 16% Template c2g1uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution Resolution 1.50 Å

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		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.		.	570	.	.	.	.	.	.	.	.	.																					580	.	.
Predicted Secondary structure																																															.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	L	N	V	L	L	V	E	D	I	E	L	N	V	I	V	A	R	S	V	L	E	K	L	G	N	S	V	D	V	A	M	T	G	K	A	A	L	E	M	F	K	P	G	.	E	Y	D	L	V	L	L	D	I	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	M
Query Conservation																																															.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																									.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		K	S	K	Y	I	V	I	F	G	C	G	R	L	G	S	L	I	A	N	L	.	A	S	S	S	G	H	S	V	V	V	V	D	K	N	E	Y	A	F	H	R	L	N	S	E	F	S	G	F	T	V	V	G	D	A	A	E	F	E	T	L	K	E	C	G	M	E	K	A	D	M	V	F	A	F	T	N	D	D	S
Template Known Secondary structure												S										.				T	T								S		G	G	G	G	G	G	S		T	T			S					S		T	T	S						T	T	T	G	G	G		S						S	S
Template Predicted Secondary structure																						.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		583	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	L	D	I	S	R	E	L	T	K	R	Y	P	R	E	D	L	P	P	L	V	A	L	T	A	N	V	L	K	D	K	Q	E	Y	L	N	A	G	M	D	D	V	L	S	K	P	L	S	V	P	A	L	T	A	M	I
Query Conservation
Alig confidence																	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		T	N	F	F	I	S	M	N	A	R	Y	M	F	N	V	.	.	.	.	E	N	V	I	A	R	V	Y	D	P	E	K	I	K	I	F	E	E	N	G	I	K	T	I	C	P	A	V	L	M	I	E	K	V	K	E	F	I
Template Known Secondary structure													T	S			.	.	.	.	S							S	S	G	G	G						T	T	T
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions