Job Description P0AEC3 Confidence 100.00% Date Thu Jan 5 11:22:59 GMT 2012 Rank 6 Aligned Residues 257 % Identity 16% Template c1y8oA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 3; PDBTitle: crystal structure of the pdk3-l2 complex Resolution 2.48 Å

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		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.									.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.
Query Sequence		T	E	R	K	R	Y	Q	D	A	L	E	R	A	S	R	D	K	T	T	F	I	S	T	I	S	H	E	L	R	T	P	L	N	G	I	V	G	L	S	R	I	L	.	.	.	.	.	.	.	.	L	D	T	E	L	T	A	E	Q	E	K	Y	L	K	T	I	H	V	S	A	V	T	L	G	N	I	F	N	D	I
Query Conservation																																												.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	L	L	E	Y	E	N	K	S	P	E	D	P	Q	V	L	D	N	F	L	Q	V	L	I	K	V	R	N	R	H	N	D	V	V	P	T	M	A	Q	G	V	I	E	Y	K	E	K	F	G	F	D	P	F	I	S	T	N	I	Q	Y	F	L	D	R	F	Y	T	N	R	I	S	F	R	M	L	I	N	Q	H
Template Known Secondary structure						G	G	G	G			T	T																			G	G	G
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.						.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.								.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																							.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.																							.	.	.	.	.	.	.
Query Sequence		I	D	M	D	K	M	E	R	R	K	V	Q	L	D	N	Q	.	.	.	.	.	P	V	D	F	T	S	F	L	A	D	L	E	N	L	S	A	L	Q	A	Q	Q	K	.	.	.	.	.	.	.	G	L	R	F	N	L	E	P	T	L	P	L	P	H	Q	V	I	T	D	G	T	R	L	R	Q	I	L	W	N	L
Query Conservation																		.	.	.	.	.																							.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	L	F	G	G	D	T	N	P	V	H	P	K	H	I	G	S	I	D	P	T	C	N	V	A	D	V	V	K	D	A	Y	E	T	A	K	M	L	C	E	Q	Y	Y	L	V	A	P	E	L	E	V	E	E	F	N	A	K	A	P	D	K	P	I	Q	V	V	Y	V	P	S	H	L	F	H	M	L	F	E	L
Template Known Secondary structure						S			S	S		S	S	T	T	S	B	T	T	B																										S												T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		407	.	.	410	.	.	.	.									.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.
Query Sequence		I	S	N	A	V	K	F	T	.	.	.	.	.	.	.	.	Q	Q	G	Q	V	T	V	R	V	R	Y	D	E	G	D	M	L	H	F	E	V	E	D	S	G	I	G	I	P	Q	D	E	L	D	K	I	F	A	M	Y	Y	Q	V	K	D	S	H	G	G	K	P	A	T	G	T	G	I	G	L	A	V	S	R	R
Query Conservation										.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		F	K	N	S	M	R	A	T	V	E	L	Y	E	D	R	K	E	G	Y	P	A	V	K	T	L	V	T	L	G	K	E	D	L	S	I	K	I	S	D	L	G	G	G	V	P	L	R	K	I	D	R	L	F	N	Y	M	Y	S	P	.	.	.	.	.	.	.	.	.	.	L	F	G	Y	G	L	P	I	S	R	L
Template Known Secondary structure														T	T		S	S													S	S										S									G	G	G	G		T	T	T			.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.											.	.	310	.	.	.	.	.	.	.	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	N	M	G	G	D	I	T	V	T	S	E	Q	G	K	G	S	T	F	T	L	T	I	H	A	P	S	V	A	E	E	V	D	D	A	F	D	E	D	D	M	P	L	P	A	L	N	V	L	L	V	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	R	Y	F	Q	G	D	L	K	L	Y	S	M	E	G	V	G	T	D	A	V	I	Y	L	K	A	L	S	S	E	S	F	E	R	L	P	V	F	N	K	S	A	W	R	H	Y	K	T	T	P	E	A	D	D
Template Known Secondary structure						T	T									T	T	T										S		G	G	G		B							S								S							S
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions