Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEC3
Confidence96.96%DateThu Jan 5 11:22:59 GMT 2012
Rank247Aligned Residues79
% Identity24%Templatec1s16B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:topoisomerase iv subunit b; PDBTitle: crystal structure of e. coli topoisomerase iv pare 43kda subunit2 complexed with adpnp
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   399400.........410.. .......420.........430.........440...... ...450..... ....460......
Predicted Secondary structure  .














........



...









Query SS confidence 













.

































. . . . . . . .








. . .










Query Sequence  LRQILWNLISNAVK. FTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDE. . . . . . . . LDKIFAMYY. . . QVKDSHGGKPA
Query Conservation 
 


 


 



. 
  
 
 
         
 
 
 
 
 

    ........   

  
 ...           
Alig confidence 













.

















..













........








...










Template Conservation 
  





 



      
  
 
 
   
 ..
 
 


 


            
       
           
 
Template Sequence  PNHLGQEVIDNSVDEALAGHAKRVDVILHADQS. . LEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSG
Template Known Secondary structure  TTT

S
TTS
..
SS



SB
TTT
SB
TT
SS
SSSSS
SS
S
Template Predicted Secondary structure 






..
































Template SS confidence 















































































   2032.......2040.........2050.........2060.... .....2070.........2080.........2090.........2100.........
 
   467..470.........
Predicted Secondary structure 


Query SS confidence 












Query Sequence  TGTGIGLAVSRRL
Query Conservation   





 
   
Alig confidence 












Template Conservation 
  
 

  
 
 
Template Sequence  GLHGVGISVVNAL
Template Known Secondary structure 

SS
T
Template Predicted Secondary structure 



Template SS confidence 












   2110.........2120..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions