Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEC3
Confidence97.30%DateThu Jan 5 11:22:59 GMT 2012
Rank238Aligned Residues99
% Identity21%Templatec1ei1B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:dna gyrase b; PDBTitle: dimerization of e. coli dna gyrase b provides a structural mechanism2 for activating the atpase catalytic center
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   399400.........410....... ..420.........430.........440...... ...450.........460.. ....
Predicted Secondary structure 



.










........









...



Query SS confidence 


















.




























. . . . . . . .















. . .



Query Sequence  LRQILWNLISNAVKFTQQG. QVTVRVRYDEGDMLHFEVEDSGIGIPQDE. . . . . . . . LDKIFAMYYQVKDSHG. . . GKPA
Query Conservation 
 


 


 



 
  
. 
 
         
 
 
 
 
 

    ........   

  
        ...    
Alig confidence 


















.












..













........















...



Template Conservation 
  

 


 



      
  
 
 
  

 ..
 
 


 


            
       
           
 
Template Sequence  LHHMVFEVVDNAIDEALAGHCKEIIVTIHADNS. . VSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSG
Template Known Secondary structure  TT



TTS
..
SS



SB
TTTSSBSTT
SS
SSSSS
SS
S
Template Predicted Secondary structure 







..































Template SS confidence 















































































   436...440.........450.........460........ .470.........480.........490.........500.........510...
 
   467..470.........480.........490.........500..
Predicted Secondary structure 









Query SS confidence 



































Query Sequence  TGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLT
Query Conservation   





 
   

   

 
 
 
  
 

 
 
 
Alig confidence 
















...















Template Conservation 
  
 

  
 
 
   ... 
     
        
Template Sequence  GLHGVGVSVVNALSQKL. . . ELVIQREGKIHRQIYE
Template Known Secondary structure 

SS
T...TT
Template Predicted Secondary structure 



...

Template SS confidence 



































   514.....520.........530 .........540......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions