|   |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
T | H | P | T | T | S | L | C | L | Q | W | L | D | S | L | D | L | T | G | K | T | V | I | D | F | G | C | G | S | G | I | L | A | I | A | A | L | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | G | A | A | K | A | I | G | I | D | I | D | P | Q | A | I | Q | A | S | R | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|   |
|   |
|   |
|
|   | . | . | . | . | . | . | . | . | . |   |
|   |   |   |
|   |
|
|
|
|
|   |   |
|
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|
|
|
|   |   |   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | E | A | H | H | F | P | I | L | A | E | H | A | R | R | R | H | G | E | Y | R | V | W | S | A | A | A | S | T | G | E | E | P | Y | S | I | A | I | T | L | A | D | A | L | G | M | A | P | G | R | W | K | V | F | A | S | D | I | D | T | E | V | L | E | K | A | R | S | G | I | Y | R | L | S | E | L | K | T | L | S |
Template Known Secondary structure |   |
T | T | T | T |  |  |  |  |  |  |  |  |  |  |  | S |
| S |
|  |  |  |  |  | S |
|
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
| T | T | S |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  | T |  |  |  | G | G | G | G | T | T | S |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | A | E | R | N | G | V | S | D | R | L | E | L | Y | L | P | K | D | Q | P | E | E | M | K | A | D | V | V | V | A | N | I | L | A | G | P | L | . |
. |
. |
. |
. |
R | E | L | A | P | L | I | S | V | L | P | V | S | G | G | L |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |
| . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |
Template Sequence |   |
P | Q | Q | L | Q | R | Y | F | M | R | G | T | G | P | H | E | G | L | V | R | V | R | Q | E | L | A | N | Y | V | E | F | S | S | V | N | L | L | E | K | Q | Y | N | V | P | G | P | F | D | A | I | F | C | R | N | V | M | I | Y | F | D | K | T | T | Q | E | D | I | L | R | R | F | V | P | L | L | K | P | D | G | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
| T | T | S |
| S |  |  |  |  |
|  |  |  |  | T | T |  |  |  |  |  |
|
| T | T |
| S | S |
|
|
|
|
|
|  |  |  |  |  |  |
| S | S | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |
  |
  |   |
253 | . | . |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
L | G | L |
Query Conservation |   |
|
|   |
Alig confidence |   |
|
|
|
Template Conservation |   |
|   |
|
Template Sequence |   |
L | F | A |
Template Known Secondary structure |   |
 |  |  |
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
258 | . | 260 |
  |