Job Description P0A8T1 Confidence 99.78% Date Thu Jan 5 11:08:40 GMT 2012 Rank 43 Aligned Residues 141 % Identity 23% Template c3q87B_ PDB info PDB header:transferase activator/transferase Chain: B: PDB Molecule:n6 adenine specific dna methylase; PDBTitle: structure of eukaryotic translation termination complex2 methyltransferase mtq2-trm112 Resolution 2.00 Å

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		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	T	T	S	L	C	L	Q	W	L	D	S	L	D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	K	L	G	A	A	K	A	I	G	I	D	I	D	P	Q	A	I	Q	A	S	R	D	N	A	E	R	N	G	V	S	D	R	L	E	L	Y	L	P	K	D	Q	P	E	E
Query Conservation
Alig confidence																																							.	.																					.	.	.	.	.	.	.	.
Template Conservation																																							.	.																					.	.	.	.	.	.	.	.
Template Sequence		G	E	D	T	Y	T	L	M	D	A	L	E	R	E	G	L	E	M	K	I	V	L	D	L	G	T	S	T	G	V	I	T	E	Q	L	R	K	.	.	R	N	T	V	V	S	T	D	L	N	I	R	A	L	E	S	H	R	G	G	.	.	.	.	.	.	.	.	N	L	V	R	A	D	L	L	C	S	I	N	Q
Template Known Secondary structure																T			S							T		T	T								T	T	.	.	T	S							S							T		S	S	S	.	.	.	.	.	.	.	.						S	T	T	T	T	S		G
Template Predicted Secondary structure																																							.	.																					.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.									.	.	.	.	.	.	70	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.													.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.																																					.														.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.																																					.														.	.	.
Query Sequence		M	K	A	D	V	V	V	A	N	I	L	A	G	P	L	.	.	.	.	.	.	.	.	.	.	.	.	R	E	L	A	P	L	I	S	V	L	P	V	S	G	G	L	L	G	L	S	G	I	L	A	S	Q	A	E	S	V	C	E	A	Y	A	D	.	S	F	A	L	D	P	V	V	E	K	E	E	W	.	.	.
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.																																					.														.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																					.																.														.	.	.
Template Conservation																																																	.
Template Sequence		E	S	V	D	V	V	V	F	N	P	P	Y	V	P	D	T	D	D	P	I	I	G	G	G	Y	L	G	R	E	V	I	D	R	F	V	D	A	V	T	V	G	M	L	Y	L	L	V	.	I	E	A	N	R	P	K	E	V	L	A	R	L	E	E	R	G	Y	G	T	R	I	L	K	V	R	K	I	L	G	E	T
Template Known Secondary structure		G	G		S									B	T	T				T	T	T	B			G	G	G													S	S							.		G	G	G												T	T												S	S	S
Template Predicted Secondary structure																																																	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
			286	.	.	.	290	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	C	R	I	T	G	R	K	N
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		V	Y	I	I	K	G	E	K	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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