Job Description P0A8T1 Confidence 99.65% Date Thu Jan 5 11:08:40 GMT 2012 Rank 128 Aligned Residues 145 % Identity 17% Template c3p2kA_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of an antibiotic related methyltransferase Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.
Predicted Secondary structure																																										.																															.	.	.
Query SS confidence																																										.																															.	.	.
Query Sequence		G	T	G	T	H	P	T	T	S	L	C	L	Q	W	L	D	S	L	D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	.	K	L	G	A	A	K	A	I	G	I	D	I	D	P	Q	A	I	Q	A	S	R	D	N	A	E	R	N	G	V	S	.	.	.	D	R	L	E	L	Y
Query Conservation																																										.																															.	.	.
Alig confidence																			.	.																						.																															.	.	.
Template Conservation																			.	.
Template Sequence		G	T	K	T	V	D	L	S	K	D	E	L	T	E	I	I	G	.	.	Q	F	D	R	V	H	I	D	L	G	T	G	D	G	R	N	I	Y	K	L	A	I	N	D	Q	N	T	F	Y	I	G	I	D	P	V	K	E	N	L	F	D	I	S	K	K	I	I	K	K	P	S	K	G	G	L	S	N	V	V	F	V
Template Known Secondary structure		T	T																.	.	T	S	S							T		T	T	S											T	T								S		G	G	G	G								T	S		G	G	G	T			S	S
Template Predicted Secondary structure																			.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		214	.	.	.					.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.									.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.																						.	.	.	.	.	.	.	.																								.	.												.
Query SS confidence						.	.	.	.																						.	.	.	.	.	.	.	.																								.	.												.
Query Sequence		L	P	K	D	.	.	.	.	Q	P	E	E	M	K	A	D	V	V	V	A	N	I	L	A	G	P	L	R	E	.	.	.	.	.	.	.	.	L	A	P	L	I	S	V	L	P	V	S	G	G	L	L	G	L	S	G	I	L	A	S	.	.	Q	A	E	S	V	C	E	A	Y	A	D	.	S	F	A	L	D	P
Query Conservation						.	.	.	.																						.	.	.	.	.	.	.	.																								.	.												.
Alig confidence						.	.	.	.																						.	.	.	.	.	.	.	.																								.	.												.
Template Conservation
Template Sequence		I	A	A	A	E	S	L	P	F	E	L	K	N	I	A	D	S	I	S	I	L	F	P	W	G	T	L	L	E	Y	V	I	K	P	N	R	D	I	L	S	N	V	A	D	L	A	K	K	E	A	H	F	E	F	V	T	T	Y	K	A	Y	F	L	S	E	Q	Y	K	A	E	L	S	N	S	G	F	R	I	D	D
Template Known Secondary structure					T	T	S			G	G	G	T	T									S											T	T											T																			S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		279	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	E	K	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	E	L	D	N
Template Known Secondary structure							G
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions