Job Description P0A8T1 Confidence 99.77% Date Thu Jan 5 11:08:40 GMT 2012 Rank 50 Aligned Residues 145 % Identity 18% Template c3opnA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative hemolysin; PDBTitle: the crystal structure of a putative hemolysin from lactococcus lactis Resolution 2.05 Å

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		149	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.
Predicted Secondary structure									.	.																																																																.
Query SS confidence									.	.																																																																.
Query Sequence		L	Q	W	L	D	S	L	.	.	D	L	T	G	K	T	V	I	D	F	G	C	G	S	G	I	L	A	I	A	A	L	K	L	G	A	A	K	A	I	G	I	D	I	D	P	Q	A	I	Q	A	S	R	D	N	A	E	R	N	G	V	S	D	R	L	E	L	Y	L	P	K	D	Q	.	P	E	E	M	K	A	D
Query Conservation									.	.																																																																.
Alig confidence									.	.																																																																.
Template Conservation
Template Sequence		E	K	A	L	K	E	F	H	L	E	I	N	G	K	T	C	L	D	I	G	S	S	T	G	G	F	T	D	V	X	L	Q	N	G	A	K	L	V	Y	A	L	D	V	G	T	N	Q	L	A	W	K	I	R	S	D	E	R	V	V	V	X	E	Q	F	N	F	R	N	A	V	L	A	D	F	E	Q	G	R	P	S
Template Known Secondary structure								T	T				T	T							T		T	T	S									T	T		S							S	S										T		T	T						S			G	G	G			G	G	G			S				S
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.															.	.	.	260	.							.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.												.											.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.												.											.	.
Query Sequence		V	V	V	A	N	I	L	A	G	P	L	R	E	L	A	P	L	I	S	V	L	P	V	S	G	G	L	L	G	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	L	A	S	.	.	.	.	.	.	Q	A	E	S	V	C	E	A	Y	A	D	.	S	F	A	L	D	P	V	V	E	K	.	.
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.												.											.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.												.											.	.
Template Conservation
Template Sequence		F	T	S	I	D	V	S	F	I	S	L	D	L	I	L	P	P	L	Y	E	I	L	E	K	N	G	E	V	A	A	L	I	K	P	Q	F	E	A	G	R	E	Q	V	G	N	G	I	I	R	D	P	K	V	H	Q	X	T	I	E	K	V	L	K	T	A	T	Q	L	G	F	S	V	K	G	L	T	F	S	P	I
Template Known Secondary structure								S	S	S		G	G	G	T								S		T	T													S																															T										S	S
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
								283	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	E	E	W	C	R	I	T	G	R	K	N
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	G	A	G	N	V	E	F	L	V	H	L	L	K	D	G
Template Known Secondary structure			B	T	T	T	B										S	S
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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